| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5112143 = | 61 (1.010) | 4 (0.070) | 3/248 | NT | 6.5% | coding (269/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B |
| ? | NC_002947 | 5112228 = | 58 (1.030) | coding (184/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B | |||||
GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112296‑5112143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacggcgaTGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCG > NC_002947/5112228‑5112374 GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGAC > 1:179679/1‑149GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGAC > 8:277393/1‑149GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGAC > 5:306818/1‑149GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGAC > 5:166805/1‑149 CAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGG > 4:121293/1‑149 CCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGC > 2:238487/1‑148 CCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGC > 2:350047/1‑148 CATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATG < 7:116127/146‑1 CATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATG > 8:116127/1‑146 ccggCGACGGCGATGGCGTCGTGCAGGTCGAGGCGCTGGCCAAGGGTGGACTCGACGCCGTTGACCTTGATGCGACCCTTGCTGATCCAGGCCTCGACGGCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTC < 4:222965/145‑1 gtctACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCTACGCCGTTGACGTTGATGCGACCCTGGCTGATCCAGGCCTAGACGTCACTGCGCGATCCAACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGC < 7:202744/145‑1 CGACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCG > 3:125124/1‑149 GACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGG < 4:369024/149‑1 GACGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCG > 4:94449/1‑148 CGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGgt > 5:328437/1‑147 CGGCGATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGAT < 7:28872/149‑1 GATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCG < 2:41317/149‑1 GATGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCG < 2:311614/149‑1 GCCAGGGTCGCATCAAGGTCAACGGCGTCGAGGCCACCCTTGGCCAGCGCGTCGACCTGCACGACGCCATCGCCGTCGACGGCAAGCTGATCAAGCGCGAGGAGGCCGCCGAGGCCACCCGCCGGGTGATCATGTACAACAAACCCGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112296‑5112143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacggcgaTGGCGTCGTGCAGGTCGACGCGCTGGCCAAGGGTGGCCTCGACGCCGTTGACCTTGATGCGACCCTGGCTGATCCAGGCCTCGACGTCACGCCGCGAGCCCACGCCAATGCGCGCCAGCACTTTCTGCAGCTTTTCGCCGGATGGCG > NC_002947/5112228‑5112374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |