| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5147378 = | 62 (1.030) | 5 (0.090) | 5/256 | NT | 7.5% | coding (483/1302 nt) | mscMB | miniconductance mechanosensitive channel protein |
| ? | NC_002947 | 5147425 = | 63 (1.090) | coding (530/1302 nt) | mscMB | miniconductance mechanosensitive channel protein | |||||
GATCCAGTCCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5147528‑5147378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATGCCGCAGGTAGGCGCCGATGGCGACGTGGTGGACATC > NC_002947/5147425‑5147570 GATCCAGTCCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGG > 4:88046/1‑149GATCCAGTCCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGG < 2:267673/148‑1GATCCAGACCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGG < 3:286543/148‑1 TCCAGTCCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTG < 5:57914/149‑1 GCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGT < 3:365797/56‑1 GCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGT > 4:365797/1‑56 CCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCG > 5:51182/1‑149 CGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCA < 7:35159/121‑1 CGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCA > 8:35159/1‑121 CAGACCGGACAGCAGCAACAGCGGCGAGCGGTC‑‑T‑‑GGGTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATG > 6:347259/1‑149 AGACCGGACAGCAGCAACAGCGGCGAGCGGTC‑‑T‑‑GGGTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATGC > 7:499/1‑149 GTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATGCCGCAGGTAGGCGCCGATGGCGACGTGGTGGACATC < 2:296638/149‑1 GTGCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATGCCGCAGGTAGGCGCCGATGGCGACGTGGTGGACAT > 3:106324/1‑148 GATCCAGTCCCCGACATGCAGCATGTCGTTGCTGGTCAGTTGCACGCTGGCGACGAATGACAGCAGGGTGTCCTTGTACACCAACAGCAATACCGCCGACATCGCACCCAGACCGGACAGCAGCAACAGCGGCGAGCGGTCGATCAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5147528‑5147378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgCGATGTCGGCGGTATTGCTGTTGGTGTACAAGGACACCCTGCTGTCATTCGTCGCCAGCGTGCAACTGACCAGCAACGACATGCTGCATGTCGGGGACTGGATCGAAATGCCGCAGGTAGGCGCCGATGGCGACGTGGTGGACATC > NC_002947/5147425‑5147570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |