New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5235947	52 (0.860)	4 (0.070)	4/256	NT	7.2%	coding (1281/2325 nt)	fecA	outer membrane ferric citrate porin
	?	NC_002947	= 5236019	53 (0.920)					coding (1353/2325 nt)	fecA	outer membrane ferric citrate porin

TTCGGCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5235795‑5235947 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAGG  <  NC_002947/5236019‑5235872                                                                                                                                                                                                                                                                                                               TTCGGCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTC                                                                                                                                                          >  6:167144/1‑149    GGCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGTGCGGCATCGAAACCCGCTTCTCGC                                                                                                                                                        <  1:221380/148‑1    GGCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCA                                                                                                                                                       <  3:58802/149‑1     GCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAG                                                                                                                                                      <  7:302933/149‑1                                             CAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTGGCGGTAGCCGATGCC                                                                                                               >  1:159317/1‑148                                             CAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCA                                                                                                                                                       <  1:370037/108‑1                                             CAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCA                                                                                                                                                       >  2:370037/1‑108                                                   CTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCG                                                                                                        >  3:263752/1‑149                                                                                  GACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTG                                                                           <  4:263752/147‑1                                                                                          CAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTGGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGG                                                                 <  2:159317/149‑1                                                                                                                                                      GCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCC     <  7:23027/149‑1                                                                                                                                                      GCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGT                                   >  7:227323/1‑119                                                                                                                                                      GCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGT                                   <  8:227323/119‑1                                                                                                                                                        AGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAG   <  2:197223/149‑1                                                                                                                                                         GTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAGG  <  3:49621/149‑1                                                                                                                                                                                                                                                                                                               TTCGGCTACGACTACAAGCAGGATGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGCGGCTACCTGGACCAAGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5235795‑5235947 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAGG  <  NC_002947/5236019‑5235872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.