| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5352055 = | 58 (0.960) | 3 (0.050) | 3/256 | NT | 5.7% | coding (2062/2106 nt) | pnp | polyribonucleotide nucleotidyltransferase |
| ? | NC_002947 | 5352093 = | 44 (0.760) | coding (2024/2106 nt) | pnp | polyribonucleotide nucleotidyltransferase | |||||
GCGCCTTCGTCAACATCCTGCCTGGCAAGGACGGTTTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5352207‑5352055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCGACAATGCGCTCAACCTTGCCGACG > NC_002947/5352093‑5352239 GCGCCTTCGTCAACATCCTGCCTGGCAAGGACGGTTTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATC < 7:31683/149‑1 CCTTCGTCAACATCCTGCCTGGCAAGGACGGTTTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAG < 3:103104/149‑1 CTTCGTCAACATCCTGCCTGGCAAGGACTGTTTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCCACATCCTCAAGGAAGGCCAGGAAGTTCAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGC > 3:6255/1‑149 TCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAG > 5:332366/1‑105 TCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAG < 6:332366/105‑1 GAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGA > 2:256049/1‑149 CTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGCCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTT < 5:261644/126‑1 CTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGCCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTT > 6:261644/1‑126 AAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCGACAATG < 1:180308/133‑1 AAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCGACAATG > 2:180308/1‑133 GCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCGACAATGCGCTCAACCTTGCCGACG > 3:204892/1‑149 GCGCCTTCGTCAACATCCTGCCTGGCAAGGACGGTTTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCTCAAGGAAGGCCAGGAAGTTGAAGTGCTTGTACTGGACGTGGACAACCGCGGCCGTATCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5352207‑5352055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGTGACTTTCTCGACGCGAGCATCGCTCAGCATGGAGATGTGCACCAAACCGTCCTTGCCAGGCAGGATGTTGACGAAGGCGCCGAAGTCGACAATGCGCTCAACCTTGCCGACG > NC_002947/5352093‑5352239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |