| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5447654 | 72 (1.200) | 6 (0.100) | 5/258 | NT | 7.9% | coding (1159/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase |
| ? | NC_002947 | = 5447683 | 70 (1.200) | coding (1188/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase | |||||
CGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5447512‑5447654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCAGGTGGAAGAAGCGCTTGAAGCGCTCGGCATCGCTGGCCATCACGTCTTCGAAGGTGACGATATCGTCGGCGCCGCTGAAGTACAGGCCGAACATGGCACCGGCCTGGGTG < NC_002947/5447683‑5447539 CGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGAT > 3:122438/1‑141CGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGAT < 4:122438/141‑1 TCACCACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTC > 3:239542/1‑147 CACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCAT > 1:152652/1‑149 ACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCAT > 3:37846/1‑148 CCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCA < 2:152652/149‑1 CCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCAG < 4:239542/149‑1 CCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCAG < 4:37846/149‑1 ATGCGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCAGGTGGAAGAAGCGCTTGAAGCGCTCGGCATCGCTGGCCATCACGTCTTCGAAGGTGACGATATCGTCGGCGCCGCTGAAGTACAGGCCGAACATGGCACCGGCCTGGGTG > 6:67587/1‑149 CGATGCCGCTGGCGTGCCATTCGTCACCACCCAGGCCGGTGCCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCACCTTCGAAGACGTGATGGCCAGCGATGCCGAGCGCTTCAAGCGCTTCTTCCACCTGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5447512‑5447654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcGCTCGGTGCCAGGTACACGCCACCGTCGAGCATCAGGTGGAAGAAGCGCTTGAAGCGCTCGGCATCGCTGGCCATCACGTCTTCGAAGGTGACGATATCGTCGGCGCCGCTGAAGTACAGGCCGAACATGGCACCGGCCTGGGTG < NC_002947/5447683‑5447539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |