New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5476602	56 (0.930)	4 (0.070)	4/256	NT	6.6%	coding (832/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
	?	NC_002947	= 5476642	60 (1.040)					coding (872/1317 nt)	PP_4813	PAP2 family protein/DedA family protein

CTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476451‑5476602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGA  <  NC_002947/5476642‑5476496                                                                                                                                                                                                                                                                                                             CTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTG                                                                                                                                                        <  6:109976/149‑1  TTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGC                                                                                                                                                       <  4:178128/149‑1           TTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCCATCAACG                                                                                                                                              >  7:77269/1‑149                                       AGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCA                                                                                                                  >  8:342578/1‑149                                                 CAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCA                                                                                                        <  7:342578/149‑1                                                  AGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAA                                                                                                       <  8:77269/149‑1                                                                                                                                                       CCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGA  <  4:361798/149‑1                                                                                                                                                                                                                                                                                                             CTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGATTTCCGCACCCAGTTGTTCCTCGGCGCCCTGCTGACCGGCCTGCTGCTGCTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476451‑5476602 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGA  <  NC_002947/5476642‑5476496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.