| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5642871 | 69 (1.150) | 4 (0.070) | 3/254 | NT | 5.6% | coding (1042/1386 nt) | dbpA | 23S rRNA specific ATP‑dependent RNA helicase |
| ? | NC_002947 | = 5642896 | 70 (1.220) | coding (1067/1386 nt) | dbpA | 23S rRNA specific ATP‑dependent RNA helicase | |||||
GACATCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5642754‑5642871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGATGACCATGTCCAGGCCATCGATGTCCAGGC < NC_002947/5642896‑5642749 GACATCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGG < 5:29012/148‑1GACATCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGG < 5:34436/148‑1 ACATCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCT < 1:171591/149‑1 TCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGAC < 8:79471/149‑1 GCCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGATGACCATGTCCAGGCCATCGATGTC < 5:90933/149‑1 CCTGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACTGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGATGACCATGTCCAGGCCATCGATGTCC < 7:81618/149‑1 TGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGAT > 1:48222/1‑122 TGGGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGAT < 2:48222/122‑1 GGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCCCGCGCCAGCTCCACGTTGATGACCATGTCCAGGCCATCGATGTCCCGGC > 4:69998/1‑149 GACATCGATGGCCTGGACATGGTCATCAACGTGGAGCTGGCGCGTGATGCCGAAATCCACGTGCACCGCGTGGGCCGTACCGGCCGCGCCGGCGAGAAAGGCGTTGCGGTCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5642754‑5642871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggGCGCGGTGGCCTTCGGCCGGTGCCACCAGGCTGACCGCAACGCCTTTCTCGCCGGCGCGGCCGGTACGGCCCACGCGGTGCACGTGGATTTCGGCATCACGCGCCAGCTCCACGTTGATGACCATGTCCAGGCCATCGATGTCCAGGC < NC_002947/5642896‑5642749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |