New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 572758578 (1.300)6 (0.100) 6/256 NT 7.6% coding (1053/1680 nt) opgG glucans biosynthesis protein G
?NC_002947 = 5727607 70 (1.210)coding (1031/1680 nt) opgG glucans biosynthesis protein G

CGCAGGGTCTGCTTGACCCAGCCCAGATCAGGGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5727433‑5727585
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgACCTGGTCGAAATCCCGACCGCCGACGAGACCAACGACAATATCGTGGCCTTCTGGAGCCCGGAGAAACTGCCGGAGCCAGGTAAGCCGTTCGAGTACGCCTACCGCCTGCACTGGACCATCGACGAGCCGAAGTTCCAGGCCC  <  NC_002947/5727607‑5727464
                                                                                                                                                                                                                                                                                                         
CGCAGGGTCTGCTTGACCCAGCCCAGATCAGGGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTC                                                                                                                                                      <  1:163882/149‑1
                          ATCAGGGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGC                                                                                                                            >  6:167275/1‑149
                              GGGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGCCGAC                                                                                                                        <  5:167275/149‑1
                               GGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTGCTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGCCGACG                                                                                                                       <  2:50967/149‑1
                                  CCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGCCGACGAGA                                                                                                                    <  6:330887/149‑1
                                          TTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCTAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGCCGACGA                                                                                                                      <  2:350375/139‑1
                                          TTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCGACCTGGTCGAAATCCCGACCGCCGACGA                                                                                                                      >  1:350375/1‑139
                                                                                                                                                   gcggCGACCTTGTCGAAATCCCGACCGCCGACGAGACCAACGACAATATCGTGGCCTTCTGGAGCCCGGAGAAACTGCCGGAGCCAGGTAAGCCGTTCGAGTACGCCTACCGCCTGCACTGGACCATCGACGAGCCGAAGTTCCAGGC    <  8:237668/144‑1
                                                                                                                                                    CGTCGACCTGGTCGAAATCCCGACCGCCGACGAGACCAACGACAATATCGTGGCCTTCTGGAGCCCGGAGAAACTGCCGGAGCCAGGTAAGCCGTTCGAGTACGCCTACCGCCTGCACTGGACCATCGACGAGCCGAAGTTCCAGGCCC  >  8:274495/1‑149
                                                                                                                                                                                                                                                                                                         
CGCAGGGTCTGCTTGACCCAGCCCAGATCAGGGGCCTGGAACTTCGGCTCGTCGATGGTCCAGTGCAGGCGGTAGGCGTACTCGAACGGCTTACCTGGCTCCGGCAGTTTCTCCGGGCTCCAGAAGGCCACGATATTGTCGTTGGTCTCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5727433‑5727585
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgACCTGGTCGAAATCCCGACCGCCGACGAGACCAACGACAATATCGTGGCCTTCTGGAGCCCGGAGAAACTGCCGGAGCCAGGTAAGCCGTTCGAGTACGCCTACCGCCTGCACTGGACCATCGACGAGCCGAAGTTCCAGGCCC  <  NC_002947/5727607‑5727464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.