New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5756090 = | 70 (1.160) | 4 (0.070) | 4/258 | NT | 5.3% | coding (1204/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG |
? | NC_002947 | 5756130 = | 75 (1.290) | coding (1244/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG |
CCAACCCAGCAACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCT‑CGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5756239‑5756090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGCAAGATCAAGGAGCTGGG > NC_002947/5756130‑5756277 CCAACCCAGCAACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCT‑CGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGG > 5:335137/1‑149 CCAACCCAGCAACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCT‑CGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGG > 6:13280/1‑149 AACCCAGCAACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCTAGGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGC > 1:106358/1‑149 TCTGCCCGCGCGCCAAGGCCTGGTCGCCCCACTGGCGCAGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGG > 2:315468/1‑149 GCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTG > 6:79662/1‑149 CCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGG > 8:38289/1‑149 CCACTGGCGCAGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGCAAG < 1:315468/149‑1 GCGCAGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGCAAGATCAA < 7:38289/148‑1 CAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGCAAGATCAAGGAGCTGGG < 7:314370/149‑1 CCAACCCAGCAACAGCGCAGCATCGCGACGGCGGCCGGCGGTGTGCTTGAGTGCCGTCT‑CGATCATGATCCGTTCAAAGCTCGGCACTGCGCTGTCCAGCAGGCTGGTCTGCCCGCGCGCCAAGGCCTGGTCGGCCCACTGGCGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5756239‑5756090 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGCAAGATCAAGGAGCTGGG > NC_002947/5756130‑5756277 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |