| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5828953 | 80 (1.330) | 5 (0.090) | 4/254 | NT | 6.1% | intergenic (‑102/+10) | rpoH/ftsX | RNA polymerase factor sigma‑32/cell division protein FtsX |
| ? | NC_002947 | = 5828972 | 78 (1.360) | coding (1017/1026 nt) | ftsX | cell division protein FtsX | |||||
TTTGCACCGGGTACCAGGGCATAGGCAGGTTGCAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5828805‑5828953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCCTAT < NC_002947/5828972‑5828825 TTTGCACCGGGTACCAGGGCATAGGCAGGTTGCAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGC < 1:283131/149‑1 TAGGCAGGTTGCAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGCGCCGCGATAGTTTTTACGTGC > 7:277172/1‑149 GGTTGCAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGCGCCGCGATAGTTTTTACGTGCCAGCAT < 1:241848/149‑1 CAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGCGCCGCGATAGTTTTTACGTGCCAGCATTGAC < 8:277172/148‑1 TCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGCGCCGCGATAGTTTTTACGTGCCAGCAT > 3:264337/1‑133 TCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGCGCCGCGATAGTTTTTACGTGCCAGCAT < 4:264337/133‑1 CTGGCGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGC < 5:362212/149‑1 TGGCGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCC > 6:58975/1‑149 GCGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCCTA > 4:329194/1‑149 GCGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCC < 6:220338/147‑1 CGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCCTAT > 2:248671/1‑149 TTTGCACCGGGTACCAGGGCATAGGCAGGTTGCAACGATGTGGTCATTCAAGAACCTCCGACTTACAAAACTCGCACCTTGTGGGCGCTGCCAACATTGACCTGGAACGACGGTACAAGTTCCACAGTGAAGAAAATGTCAATGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5828805‑5828953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcGCCGCGATAGTTTTTACGTGCCAGCATTGACATTTTCTTCACTGTGGAACTTGTACCGTCGTTCCAGGTCAATGTTGGCAGCGCCCACAAGGTGCGAGTTTTGTAAGTCGGAGGTTCTTGAATGACCACATCGTTGCAACCTGCCTAT < NC_002947/5828972‑5828825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |