New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5970207	73 (1.210)	4 (0.070)	3/256	NT	5.2%	coding (1087/2124 nt)	PP_5236	hypothetical protein
	?	NC_002947	= 5970251	76 (1.310)					coding (1043/2124 nt)	PP_5236	hypothetical protein

CCGACAGCGCGTAATGCACAGGCAGCAGCATGTGAACGGCCGTCACACAGGCGCTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5970062‑5970207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGGCGTGCCTTTTCGCTGTTTGGCCGAGCTGATACTGCGCGATGGCATGGCAGATGAGAAGCAACTGTTACACGGCGCCATTGAGCGCCTGTGTGA  <  NC_002947/5970251‑5970104                                                                                                                                                                                                                                                                                                        CCGACAGCGCGTAATGCACAGGCAGCAGCATGTGAACGGCCGTCACACAGGCGCTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCGACT                                                                                                                                                   >  4:294359/1‑149                                                  GGCGCTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCGACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCAT                                                                                                  <  3:294359/149‑1                                                     GCTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCGACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGG                                                                                               >  3:320848/1‑149                                                      CTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCGACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGGC                                                                                              <  2:116328/149‑1                                                      CTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCGACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGGC                                                                                              <  4:320848/149‑1                                                                                                                                               CGCGACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGGCGTGCCTTTTCGCTGTTTGGCCGAGCTGATACTGCGCGATGGCATGGCAGATGAGAAGCAACTGTTACACGGCGCCATTGAGCGCCTGT      <  3:259230/148‑1                                                                                                                                                  GACTTTGGCGCGAGCTTGGCGTGTAATGCCGATCTCGGCGCCATCCGCGCCATGGGCGTGCCTTTTCGCTGTTTGGCCGAGCTGATACTGCGCGATGGCATGGCAGATGAGAAGCAACTGTTACACGGCGCCATTGAGCGCCTGTGTGA  >  8:329585/1‑149                                                                                                                                                                                                                                                                                                        CCGACAGCGCGTAATGCACAGGCAGCAGCATGTGAACGGCCGTCACACAGGCGCTCAATGGCGCCGTGTAACAGTTGCTTCTCATCTGCCATGCCATCGCGCAGTATCAGCTCGGCCAAACAGCGAAAAGGCACGCCCATGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5970062‑5970207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgACTTTGGCGCGAGCTTGGCGTGCAATGCCGATCTCGGCGCCATCCGCGCCATGGGCGTGCCTTTTCGCTGTTTGGCCGAGCTGATACTGCGCGATGGCATGGCAGATGAGAAGCAACTGTTACACGGCGCCATTGAGCGCCTGTGTGA  <  NC_002947/5970251‑5970104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.