New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 603706455 (0.910)4 (0.070) 4/260 NT 6.7% coding (172/906 nt) argB acetylglutamate kinase
?NC_002947 = 6037102 57 (0.970)coding (210/906 nt) argB acetylglutamate kinase

GTCCGAAGCACTGCCTTACATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6036937‑6037064
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCACAGCCTTCATCAGCACGATGTCACGGGCGAAGCCCGTCTTGAGCTCCTCGCTCTCCATCGCGTTGCCGCCGTACTTGATCACCAG  <  NC_002947/6037102‑6036980
                                                                                                                                                                                                                                                           
GTCCGAAGCACTGCCTTACATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTGCGGGCCACCACCGTGGACTAC                                                                                                        >  3:185348/1‑149
               TTACATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTGCGGGCCACCACCGTGGACTACCACCGGGTTGATGCC                                                                                         >  1:159285/1‑149
                  CATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTGCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCA                                                                                       <  2:159285/148‑1
                   ATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTGCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCACA                                                                                     <  4:185348/149‑1
                                                                                                                              TGCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCACAGCCTTCATCAGCACGATGTCACGGGCGAAGCCCGTCTTGAGCTCCTCGCTCTCCATCGCGTTGCCGCCGTACTTGATCACCAG  >  7:13904/1‑125
                                                                                                                              TGCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCACAGCCTTCATCAGCACGATGTCACGGGCGAAGCCCGTCTTGAGCTCCTCGCTCTCCATCGCGTTGCCGCCGTACTTGATCACCAG  <  8:13904/125‑1
                                                                                                                                                                                                                                                           
GTCCGAAGCACTGCCTTACATCCGCCGCTTTGTCGGCAAGACCCTGGTGATCAAGTACGGCGGCAACGCGATGGAGAGCGAGGAGCTCAAGACGGGCTTCGCCCGTGACATCGTGCTGATGAAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6036937‑6037064
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCGGGCCACCACCGTGGACTACCACCGGGTTGATGCCCACAGCCTTCATCAGCACGATGTCACGGGCGAAGCCCGTCTTGAGCTCCTCGCTCTCCATCGCGTTGCCGCCGTACTTGATCACCAG  <  NC_002947/6037102‑6036980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.