New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6077821 =	62 (1.030)	3 (0.060)	3/218	NT	6.0%	intergenic (‑123/+115)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	6077921 =	43 (0.870)					intergenic (‑223/+15)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter

GCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6077991‑6077821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAA  >  NC_002947/6077921‑6078067                                                                                                                                                                                                                                                                                                                                GCCTGTGCGCCGTCGGTCTAGCCGTGCGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACG                                                                                                                                                                           >  2:203354/1‑149  CCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTATTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGG                                                                                                                                                                          >  3:90154/1‑149   CTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGC                                                                                                                                                                         <  1:203354/149‑1      TGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTT                                                                                                                                                                      <  3:170896/149‑1        CGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTA                                                                                                                                                                     <  1:177454/148‑1         GCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGC                                                                                                                                                                   >  2:295429/1‑149          CCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCC                                                                                                                                                                  <  2:139619/149‑1            GTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTATGTGTCGGCCGTGAGGCCAGTGCCAAACCCCTGTAGGAACGGCTTTAGCCGC                                                                                                                                                                >  5:146429/1‑149            GTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGC                                                                                                                                                                <  4:299080/149‑1               GGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCG                                                                                                                                                               >  6:186427/1‑147                 TCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGA                                                                                                                                                           <  2:62602/149‑1                              CTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC                                                                                                                                                        <  8:246025/139‑1                              CTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC                                                                                                                                                        >  7:246025/1‑139                                             AACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGG                                                                                                                                                         >  5:297706/1‑123                                             AACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGG                                                                                                                                                         <  6:297706/123‑1                                                                                       CTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCG                                                                                     >  2:28129/1‑149                                                                                             CCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGG                                                                               >  5:34446/1‑149                                                                                                CTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCT                                                                            <  1:28129/149‑1                                                                                                                                                    CGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCA                        <  4:278053/149‑1                                                                                                                                                      GCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCAC                       >  2:61494/1‑148                                                                                                                                                      GCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCAC                       >  7:265277/1‑148                                                                                                                                                          TAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATC                   <  3:211022/148‑1                                                                                                                                                          TAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATC                   <  3:215818/148‑1                                                                                                                                                           AGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCG                  <  3:164157/148‑1                                                                                                                                                             CCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCA                           <  5:216632/137‑1                                                                                                                                                                  AAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGC          <  6:34446/149‑1                                                                                                                                                                        CCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCA    <  1:61494/149‑1                                                                                                                                                                          AGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAA  <  2:199560/149‑1                                                                                                                                                                                                                                                                                                                                GCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGTTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6077991‑6077821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAA  >  NC_002947/6077921‑6078067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.