New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	205046 =	NA (NA)	11 (0.190)	6/258	NT	13.9%	coding (10552/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	205784 =	70 (1.160)					coding (11290/26049 nt)	PP_0168	putative surface adhesion protein

GGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAA  >  NC_002947/204902‑205079                                                                                                                                                 |                                  ggCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGt                                 <  4:371353/147‑1 (MQ=255)  gCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCa                              <  5:337369/149‑1 (MQ=255)           cTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAATAAAGACGGCTTGCCGATCAATAACCACAGCGCATTGACCTTc                     <  4:105933/149‑1 (MQ=255)                    aaGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGAc                         <  7:189503/136‑1 (MQ=37)                    aaGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGAc                         >  8:189503/1‑136 (MQ=37)                    aaGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGc            >  7:148792/1‑149 (MQ=35)                       tGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGAc         >  5:295987/1‑149 (MQ=33)                         aCCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACgg       >  6:355705/1‑149 (MQ=32)                              tACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCaaaa  <  1:333541/149‑1 (MQ=11)                              tACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCaaaa  <  2:165250/149‑1 (MQ=11)                                                                                                                                                 |                                  GGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCGACGAAGTGGTGGCCAAGTTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAA  >  NC_002947/204902‑205079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.