New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 42364662 (1.030)4 (0.070) 4/252 NT 6.5% coding (302/2787 nt) PP_0348 hypothetical protein
?NC_002947 = 423667 57 (1.000)coding (281/2787 nt) PP_0348 hypothetical protein

CGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTCACCAT  >  NC_002947/423500‑423793
                                                                                                                                                    |                                                                                                                                                   
cGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGC                                                                                                                                                     <  8:240837‑M1/147‑1 (MQ=255)
     tCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa                                                                                                                                              <  1:314665/149‑1 (MQ=255)
       cggAGTCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCCGGGTGCCTGGAAGGTAGCTTCGCCAG‑‑TTGGTCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAg                                                                                                                                             <  6:201712/146‑1 (MQ=255)
       atGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAgg                                                                                                                                            >  5:295804/2‑149 (MQ=255)
        tGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAggg                                                                                                                                           >  6:15425/1‑149 (MQ=255)
        tGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAggg                                                                                                                                           >  7:176778/1‑149 (MQ=255)
          aGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTa                                                                                                                                         <  2:60249/149‑1 (MQ=255)
            gCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa                                                                                                                                              <  3:91660/142‑1 (MQ=255)
            gCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa                                                                                                                                              >  4:91660/1‑142 (MQ=255)
              gTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTgg                                                                                                                                     <  8:24746/149‑1 (MQ=255)
                gAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCGTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTgg                                                                                                                                     >  5:322086/1‑147 (MQ=255)
                 aGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAg                                                                                                                                  <  3:189589/149‑1 (MQ=255)
                  gCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAgg                                                                                                                                 <  4:219092/149‑1 (MQ=255)
                     tAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTgc                                                                                                                              >  3:89362‑M2/1‑147 (MQ=255)
                       gggCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGGGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTg                                                                                                                               <  1:102318‑M2/148‑2 (MQ=255)
                       gggCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTgcag                                                                                                                            >  4:165171‑M2/1‑145 (MQ=255)
                        ggCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa                                                                                                                                              <  2:167330/130‑1 (MQ=255)
                        ggCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa                                                                                                                                              >  1:167330/1‑130 (MQ=255)
                         gCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCacctgccactaccctcccagcgcaggc                                                                                                                          <  2:324763‑M1/149‑28 (MQ=255)
                         gCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGt                                                                                                                                <  4:80371/143‑1 (MQ=255)
                         gCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGt                                                                                                                                >  3:80371/1‑143 (MQ=255)
                               ggcggTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCacctgccactaccctcccagcgcaggcatatgc                                                                                                                    <  6:361726‑M1/149‑34 (MQ=255)
                                    tACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGt                                                                                                               <  5:108622/149‑1 (MQ=255)
                                           aaCGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATa                                                                                                                 <  6:2823/140‑1 (MQ=255)
                                           aaCGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATa                                                                                                                 >  5:2823/1‑140 (MQ=255)
                                            aCGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGc                                                                                                       <  6:329983/149‑1 (MQ=255)
                                             cGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCt                                                                                                      <  6:322086/149‑1 (MQ=255)
                                             cGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCt                                                                                                      >  3:200773/1‑149 (MQ=255)
                                              gatgatCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTg                                                                                                     >  2:153662/1‑149 (MQ=255)
                                               atgatCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCt                                                                                                      >  6:199030/1‑147 (MQ=255)
                                                tgatCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAg                                                                                                   >  5:195259/1‑149 (MQ=255)
                                                   tCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCgg                                                                                                >  3:133039/1‑149 (MQ=255)
                                                       tgtgCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGc                                                                                            <  2:102318/149‑1 (MQ=255)
                                                           ccTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCaa                                                                                        <  6:195259/149‑1 (MQ=255)
                                                            cTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCGGCGCTGGGAGGGTAGTGGCAGGTGCAGGAAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAg                                                                                       <  7:236924/149‑1 (MQ=255)
                                                                            ccAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGgc                                                                       >  6:124885/1‑149 (MQ=255)
                                                                             cAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGgcg                                                                      >  7:11239/1‑148 (MQ=255)
                                                                               g‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGgcg                                                                      >  1:244189/1‑147 (MQ=255)
                                                                                  ttGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCacctgccactaccctcccagcgcagg                                                                                                                           >  5:265423‑M1/1‑67 (MQ=255)
                                                                                  ttGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCacctgccactaccctcccagcgcagg                                                                                                                           <  6:265423‑M1/93‑27 (MQ=255)
                                                                                    gggCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGtt                                                                 >  2:228560/1‑149 (MQ=255)
                                                                                    gggCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGACAGGGGCATATGACTCCGCTGGGAGGGAAGTGGCAGGTGCAGGCAGGCCCATAGTTGAACGGCTGACCGGTAGCCCAAGGACTCGTCGACCAGGCGCAGtt                                                                 >  6:303219/1‑149 (MQ=255)
                                                                                     ggCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTc                                                                <  8:176778/149‑1 (MQ=255)
                                                                                       ccGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCaa                                                              <  4:200773/149‑1 (MQ=255)
                                                                                            ggCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCg                                                         <  6:295804/149‑1 (MQ=255)
                                                                                               cTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCa                                                                    <  3:336058/135‑1 (MQ=255)
                                                                                               cTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCa                                                                    >  4:336058/1‑135 (MQ=255)
                                                                                                   cagcagTACGCGGTAGAGCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGTTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGc                                                   <  3:111868/148‑1 (MQ=255)
                                                                                                   cagcagAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGc                                                   <  1:228560/148‑1 (MQ=255)
                                                                                                          aCGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAgcgc                                           >  3:279861/1‑149 (MQ=255)
                                                                                                           cgcgGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAATGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGcc                                          >  1:97542/1‑149 (MQ=255)
                                                                                                            gcgGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGc                                                                             >  7:158984/1‑113 (MQ=255)
                                                                                                            gcgGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGc                                                                             <  8:158984/113‑1 (MQ=255)
                                                                                                                tAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTgcg                                     >  7:247768/1‑149 (MQ=255)
                                                                                                                   aCCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCTACCTCGGCCAGCATCAGCGCCTTGCGCAg                                  >  3:58126/1‑149 (MQ=255)
                                                                                                                     cTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGt                                                                                                               <  8:262882/70‑1 (MQ=255)
                                                                                                                     cTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGt                                                                                                               >  7:262882/1‑70 (MQ=255)
                                                                                                                     cTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTg                                <  1:153662/149‑1 (MQ=255)
                                                                                                                        tgGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGc                               >  7:209118/1‑147 (MQ=255)
                                                                                                                        tgGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGc                               <  8:105542/147‑1 (MQ=255)
                                                                                                                            cTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGt                                                                                     <  6:53110/89‑1 (MQ=255)
                                                                                                                            cTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGt                                                                                     >  5:53110/1‑89 (MQ=255)
                                                                                                                            cTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCcagcag                         >  1:222989/1‑149 (MQ=255)
                                                                                                                             ttttGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCTGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCagcagc                        >  2:213495/1‑149 (MQ=255)
                                                                                                                             ttttGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCagcagc                        >  8:253486/1‑149 (MQ=255)
                                                                                                                                  gCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCtttt                    <  5:199030/148‑1 (MQ=255)
                                                                                                                                   ccAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGt                  >  8:311008/1‑149 (MQ=255)
                                                                                                                                     aGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCt                <  3:22637/149‑1 (MQ=255)
                                                                                                                                         gCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgcc            <  6:361726‑M2/149‑117 (MQ=255)
                                                                                                                                         gCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTgggg            <  5:15425/149‑1 (MQ=255)
                                                                                                                                              tGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTc       <  2:97542/149‑1 (MQ=255)
                                                                                                                                               gCCTGCGCTGGGAGGGTAGTGGCAGGTgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggc      <  2:324763‑M2/149‑123 (MQ=255)
                                                                                                                                                ccTGCGCTGGGAGGGTAGTGGCAGGTgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaa                                                             <  6:265423‑M2/93‑68 (MQ=255)
                                                                                                                                                ccTGCGCTGGGAGGGTAGTGGCAGGTgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaa                                                             >  5:265423‑M2/1‑26 (MQ=255)
                                                                                                                                                ccTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCa                                               <  3:97287/107‑1 (MQ=255)
                                                                                                                                                ccTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCa                                               >  4:97287/1‑107 (MQ=255)
                                                                                                                                                ccTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTCa      <  4:133039/148‑1 (MQ=255)
                                                                                                                                                 cTGCacctgccactaccctcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccc    >  4:165171‑M1/1‑4 (MQ=255)
                                                                                                                                                  tGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTCACCa   >  6:363627/1‑149 (MQ=255)
                                                                                                                                                   gcgcTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCTACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTCACCAt  <  4:58126/149‑1 (MQ=255)
                                                                                                                                                   gCacctgccactaccctcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggcccta  >  3:89362‑M1/1‑2 (MQ=255)
                                                                                                                                                    cacctgccactaccctcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaaccctggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccc  <  1:102318‑M1/148‑148 (MQ=255)
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CGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAG‑‑TTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGGCAGGTGCAGGCAGGCCCATAGTTGATCGGCTGAGCGGTAGCCCAAGGTCTCGTCGCCCAGGCGCAGTTCAACCTCGGCCAGCATCAGCGCCTTGCGCAGTGCCAGCAGCTTTTGTCTGGGGGTTTCACCAT  >  NC_002947/423500‑423793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.