New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1311719	49 (0.810)	4 (0.070)	4/240	NT	9.1%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311778	36 (0.660)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA

ACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAT  >  NC_002947/1311573‑1311866                                                                                                                                                    |                                                                                                                                                    aCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                   <  3:61580/149‑1 (MQ=255)  cccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAg                                                                                                                                                  >  7:346146/1‑149 (MQ=255)   ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGc                                                                                                                                                 <  2:81492/149‑1 (MQ=255)    cTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc                                                                                                                                                >  5:151756/1‑149 (MQ=255)     tgtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGccc                                                                                                                                               >  6:329388/1‑149 (MQ=255)           gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAg                                                                                                                                         >  6:74607/1‑149 (MQ=255)            aCTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAg                                                                                                                                         >  6:180002/1‑148 (MQ=255)               gTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                     >  5:98649/1‑149 (MQ=255)                tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAt                                                                                                                                      <  3:243371/147‑1 (MQ=255)                 ccAGAGGCCGTATAGGAAGGAGTACTTCAGCCTTCCTGACTAATGGCC‑CAATGATTTCTACGATTTGGTGATAACTCCACTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCa                                                                                                                                   <  5:70236/149‑1 (MQ=255)                   agagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCAGCAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAc                                                                                                                                  >  1:269871/1‑149 (MQ=255)                     agGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGc                                                                                                                               >  2:115622/1‑149 (MQ=255)                       gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCa                                                                                                                                       >  6:353447/1‑139 (MQ=255)                       gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCa                                                                                                                                       <  5:353447/139‑1 (MQ=255)                            ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGa                                                                                                                         <  1:115622/148‑1 (MQ=255)                                gaaggaGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCa                                                                                                                    >  1:22238/1‑149 (MQ=255)                                gaaggaGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACGGCGGTGGATGCCa                                                                                                                    >  4:290394/1‑149 (MQ=255)                                gaaggaGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCACAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACTGCGGTGGATGCCa                                                                                                                    >  1:310596/1‑149 (MQ=255)                                  aggaGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatcca                                                                                                                  >  3:221450‑M1/1‑114 (MQ=255)                                     aGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGcttcgcgg                                                                                                               <  6:230808/149‑8 (MQ=255)                                          ttAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa                                                                                                                                          <  2:370658/117‑1 (MQ=255)                                          ttAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa                                                                                                                                          >  1:370658/1‑117 (MQ=255)                                          ttAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGc                                                                                                          >  1:228728/1‑149 (MQ=255)                                              gCCTTCCTGACTAATGGCA‑GAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCCAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgt                                                                                                      <  6:67788/149‑1 (MQ=255)                                                   ccTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTc                                                                                                  <  6:98649/148‑1 (MQ=255)                                                     ttaCTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt                                                                                                                        <  8:124409/122‑1 (MQ=255)                                                     ttaCTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt                                                                                                                        >  7:124409/3‑124 (MQ=255)                                                      gACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACGGCGGTGGGTGCCACCCGCGTTGGCGGTGTTGGCgg                                                                                              >  2:120799/1‑149 (MQ=255)                                                       aCTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg                                                                                              <  2:269871/148‑1 (MQ=255)                                                        cTAATGCCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGc                                                                                            <  1:220185/149‑1 (MQ=255)                                                         tAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatcccccgcagtggatgcttcgcggggc                                                                                           >  2:125235‑M1/1‑91 (MQ=255)                                                         tAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACCCTGCGGTGGATGCCACCGGCTTTGACGGTGTTAGCGGGCg                                                                                           >  3:167320/1‑149 (MQ=255)                                                           aTGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggct                                                                                           <  1:144738‑M1/147‑59 (MQ=255)                                                            tGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgc                                                                                        <  1:118519‑M1/149‑62 (MQ=255)                                                            tGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgc                                                                                        >  4:96581‑M2/1‑147 (MQ=255)                                                              gCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcc                                                                                       >  5:180002‑M2/1‑145 (MQ=255)                                                                   aaTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAATCATGCACTGCGGTGGATTCCAACGGCTTTGGCGGTGTTAGCGGGCGTgcccgcga                                                                                  <  3:105629‑M2/149‑9 (MQ=255)                                                                           cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACCCTGCGGTGGATGCCACCGGCTTTTGCGGTGTTAGCGGGCGTGCCCCCACCCACaact                                                                          >  6:80824/1‑147 (MQ=38)                                                                            tACTATTTGGTTATAACTCCAATCGCTGTGAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgtg                                                                                                     <  6:58519/121‑1 (MQ=255)                                                                            tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCCTCCCCGGCGGGGGGTGGCACCCGCGTTGGCGGGGTTCGGGGGCGTGCCCGGTCCCCCAAggg                                                                         >  8:162300/1‑149 (MQ=255)                                                                            tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgtg                                                                                                     >  5:58519/1‑121 (MQ=255)                                                                              cGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAgggg                                                                        <  5:74607/148‑1 (MQ=255)                                                                                     gTTATAACTCCACTCGCAGTGTCGAATAAATTTGGGGCCCTCATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgggg                                                                 <  8:162647/148‑1 (MQ=255)                                                                                      ttATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt                                                                                                                        <  8:69253/92‑1 (MQ=255)                                                                                         taACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGGGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgc                                                            <  7:259065/149‑1 (MQ=255)                                                                                           aCTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTgcgc                                                          <  5:329388/149‑1 (MQ=255)                                                                                                  tCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATCCACTGCGGTGGATGCCACCGGCTTTGGCGGTGTTAGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCGagccag                                                   >  1:305442/1‑149 (MQ=255)                                                                                                    gCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccagc                                                  <  2:22238/148‑1 (MQ=255)                                                                                                       gtcagcaaTAAATTTGGGCCCCTAATGCCTCCCTGTGGCAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCggg                                                                  <  1:784/123‑1 (MQ=25)                                                                                                                       gggCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCt                               <  1:240435/148‑1 (MQ=255)                                                                                                                         gCCCTAATGCCTTCCGGGGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGGGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTcc                            <  4:167320/149‑1 (MQ=255)                                                                                                                             tAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCCGCTTTGCCGGTGTTCGCGGGCGTGCCCGCGCCCACAA‑GGGCGCGGGGCCTGCGCTAGCCAGCCCCCAGCACGCGAATGGCTTCCAGgcg                       >  2:280860/1‑149 (MQ=255)                                                                                                                                tGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGgc                        <  3:206382/146‑1 (MQ=255)                                                                                                                                tGCCTTCCTGTGGGAGCGGGCGAGCCCCCGCAGCATACACAGGGGGGGATGGCACCCGCGTTGGCGGTGTTGGCGGGCGTGGCCGCGCCCCCAAGGGGCGCGGGGGCAGCGGAAGCCAGCCCCCCGCCCCCGCATGGCGTACAGgggcg                     >  4:206382/1‑148 (MQ=255)                                                                                                                                       cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc              <  8:346146/149‑1 (MQ=255)                                                                                                                                          tgGGAGCGGGCTAGCCGGCGAAGCATCCACTGCGGTGTATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  6:31653/147‑1 (MQ=255)                                                                                                                                          tgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  2:58437/147‑1 (MQ=255)                                                                                                                                          tgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  5:134352/147‑1 (MQ=255)                                                                                                                                          tgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTCCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc             <  8:6442/147‑1 (MQ=255)                                                                                                                                             tcgcgGGCacgcccgctaacaccgccaaagccgttggaatccaccgcagtgcatgattcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt        <  3:105629‑M1/147‑142 (MQ=255)                                                                                                                                               gCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGTCGCAGGGCGGCCTTCTCCa      <  6:151756/149‑1 (MQ=255)                                                                                                                                                  ggCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgc    >  5:180002‑M1/1‑3 (MQ=255)                                                                                                                                                  ggCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCCGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCACCCACCACCACCCGAATGGCTTCCACGCGCAGGGCGGCCTTATCCAGc    >  2:92807/1‑148 (MQ=38)                                                                                                                                                   gCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgcca  >  4:96581‑M1/1‑2 (MQ=255)                                                                                                                                                   gCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgcca  <  1:118519‑M2/149‑89 (MQ=255)                                                                                                                                                   gCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAt  >  1:80978/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCA‑CAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAT  >  NC_002947/1311573‑1311866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.