New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2765041 =36 (0.600)3 (0.050) 3/252 NT 7.8% noncoding (183/199 nt) PP_mr33 Cobalamin regulatory region
?NC_002947 2765088 = 37 (0.650)noncoding (136/199 nt) PP_mr33 Cobalamin regulatory region

GCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTG  >  NC_002947/2764893‑2765188
                                                                                                                                                    |                                                                                                                                                   
gCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTa                                                                                                                                                     <  6:266001/149‑1 (MQ=255)
    ggTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGGGAATGTAGGcc                                                                                                                                                 >  2:189132/1‑149 (MQ=255)
    gatggtctaccatgcgggccgccggtttccaccacggaactaacagggaatcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGcc                                                                                                                                                 >  6:238441‑M1/145‑149 (MQ=255)
    gatggtccaccatgcgggccgccggtttccaccacggaactaacagggaatcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGcc                                                                                                                                                 <  2:255920‑M1/5‑1 (MQ=255)
     atggtctaccatgcgggccgccggtttccaccacggaactaacagggaatcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGCCg                                                                                                                                                >  8:181015‑M1/144‑149 (MQ=255)
            aaCGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGtc                                                                                                                                         >  5:114408/1‑149 (MQ=255)
                     gcaTGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTg                                                                                                                                >  8:208317/1‑149 (MQ=255)
                      caTGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTgg                                                                                                                               <  2:347591/149‑1 (MQ=255)
                       aTGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGt                                                                                                                              <  8:350714/149‑1 (MQ=255)
                         gCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAg                                                                                                                                            <  8:21196/133‑1 (MQ=255)
                         gCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAg                                                                                                                                            >  7:21196/1‑133 (MQ=255)
                           tGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAgg                                                                                                                                                   <  6:45306/124‑1 (MQ=255)
                           tGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAgg                                                                                                                                                   >  5:45306/1‑124 (MQ=255)
                               cGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACg                                                                                                                      >  7:129417/1‑149 (MQ=255)
                                    tcCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCg                                                                                                                 >  1:255920/1‑149 (MQ=255)
                                      cTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCGCGGc                                                                                                               >  8:46033/1‑149 (MQ=255)
                                      cTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGc                                                                                                               >  8:36257/1‑149 (MQ=255)
                                       tATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCt                                                                                                              >  3:96618/1‑149 (MQ=255)
                                            taacagggaatcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGc                                                                                                         <  1:283087‑M1/45‑1 (MQ=255)
                                               aGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCAAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCtt                                                                                                      >  1:147538/1‑149 (MQ=255)
                                                 gggaatcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTcc                                                                                                    >  2:283087‑M1/100‑149 (MQ=255)
                                                    tGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCgg                                                                                                 >  4:161895/1‑149 (MQ=255)
                                                      tcccaggcctgccaatacaggccaatcggaactgcccccgcaactgtaggtgccgagcctgctccatcgatgccactgggcctgccgcccgggaAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGggc                                                                                               >  3:73161‑M1/95‑149 (MQ=255)
                                                         aGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGggcgg                                                                                             <  3:161895/148‑1 (MQ=255)
                                                             aCGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGc                                                                                        >  4:349654/1‑149 (MQ=255)
                                                                 aCGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAg                                                                                    >  8:88169/1‑149 (MQ=255)
                                                                   ggACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTg                                                                                  <  5:276788/149‑1 (MQ=255)
                                                                     aCAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGc                                                                                <  4:96618/149‑1 (MQ=255)
                                                                         gCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGAAGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATc                                                                             >  5:23773/1‑148 (MQ=255)
                                                                          cATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGa                                                                           <  6:23773/149‑1 (MQ=255)
                                                                            tCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATg                                                                         <  6:114408/149‑1 (MQ=255)
                                                                                cGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGc                                                                     <  3:34234/149‑1 (MQ=255)
                                                                                cGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGc                                                                     <  7:208317/149‑1 (MQ=255)
                                                                                     cccAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCt                                                                >  5:305368/1‑149 (MQ=255)
                                                                                       cAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCg                                                              >  2:130630/1‑149 (MQ=255)
                                                                                                gCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTa                                                       >  1:327461/1‑147 (MQ=255)
                                                                                                     ggCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGc                                                >  4:173383/1‑149 (MQ=255)
                                                                                                       cAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCgg                                              <  3:21509/149‑1 (MQ=255)
                                                                                                        aaCACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCggg                                             <  1:189132/149‑1 (MQ=255)
                                                                                                        aaCACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCggg                                             <  4:329120/149‑1 (MQ=255)
                                                                                                                      aTCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTg                               <  6:305368/149‑1 (MQ=255)
                                                                                                                       tCCCGGACACCCCGCCGGTTGGGGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTgg                              <  3:349654/149‑1 (MQ=255)
                                                                                                                        cccGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCGGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGc                             >  1:195037/1‑149 (MQ=255)
                                                                                                                         ccGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGc                             <  1:130630/148‑1 (MQ=255)
                                                                                                                                       ggTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGcc              >  4:5628/1‑149 (MQ=255)
                                                                                                                                        gTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCt             >  6:266089/1‑149 (MQ=255)
                                                                                                                                               aaTGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTc      <  2:327461/149‑1 (MQ=255)
                                                                                                                                                 tGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTccc    >  2:241573/1‑149 (MQ=255)
                                                                                                                                                   tAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTg  <  7:36257/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCAGGGTGGCGAAACGGAGCAGCATGCTGGGCGATCTCCTATCGGACAGTTCTGGTGAGGAACGCACGGACAGGCATCGCCGAGCCCCAGCGGGTGGCTGGGGCAACACGGATGGCCAATCCCGGACACCCCGCCGGTTGGTGAATGTAGGCCGGCAGGTCTCCTGACTGGTGCGTCACGGCCCGGCTCCGGCCTTCCCGGGCGGCAGGCCCAGTGGCATCGATGGAGCAGGCTCGGCACCTACAGTTGCGGGGGCAGTTCCGATTGGCCTGTATTGGCAGGCCTGGGATTCCCTG  >  NC_002947/2764893‑2765188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.