New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5671615 =	71 (1.180)	8 (0.160)	6/218	NT	14.7%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671700 =	35 (0.710)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein

CACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCG  >  NC_002947/5671468‑5671763                                                                                                                                                    |                                                                                                                                                          ccagtcgtcggttaccaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgatg                                                                                                                                                          <  4:25781‑M1/2‑1 (MQ=255)  aCGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTtgt                                                                                                                                                         <  1:64612/149‑1 (MQ=255)   agtcgtcggttaccaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgcgcggccggtgtacggtaaaggcatgcattatcgatgtg                                                                                                                                                        >  4:33866‑M1/146‑149 (MQ=255)    gtcgtcggttaccaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTgg                                                                                                                                                       >  3:33311‑M1/145‑149 (MQ=255)      ggAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTgg                                                                                                                                                       <  1:88415/147‑1 (MQ=255)      ggAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTgg                                                                                                                                                       >  5:373734/1‑147 (MQ=255)            cGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑Gc                                                                                                                                             <  4:58135/149‑1 (MQ=255)              accaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGt                                                                                                                                           <  8:55262‑M1/15‑1 (MQ=255)              aGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑Gcac                                                                                                                                           <  5:75871/149‑3 (MQ=255)              aGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGt                                                                                                                                           >  3:104196/1‑149 (MQ=255)               ccaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGt                                                                                                                                           >  6:319054‑M1/134‑148 (MQ=255)               ccaggcgcaagcgttcgcccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTg                                                                                                                                          >  8:36293‑M1/134‑149 (MQ=255)                cGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGc                                                                                                                                         >  8:2352/1‑149 (MQ=255)                   cTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCcg                                                                                                                                      >  7:321467/1‑149 (MQ=255)                          aGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGGGCGG‑‑GGGGGGCCCCGGagag                                                                                                                               >  1:370728/1‑149 (MQ=255)                          aGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAagag                                                                                                                               <  7:2352/149‑1 (MQ=255)                          aGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAaga                                                                                                                                <  3:54876/148‑1 (MQ=255)                          aGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAaga                                                                                                                                <  1:194216/148‑1 (MQ=255)                           gTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAagaga                                                                                                                              <  4:91455/149‑1 (MQ=255)                           gTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAaga                                                                                                                                >  6:308098/1‑147 (MQ=255)                              ccTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGCGTGCCCGCGAagagag                                                                                                                             >  1:316130/1‑149 (MQ=255)                              ccTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCa                                                                                                                           <  5:219188/149‑1 (MQ=255)                                cccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAAc                                                                                                                         <  2:5289‑M1/33‑1 (MQ=255)                                 ccagagccaacgggctcaggcaaacgagcagcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAAcc                                                                                                                        <  4:288756‑M1/34‑1 (MQ=255)                                  cgcCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAAcc                                                                                                                        <  3:232550/148‑1 (MQ=255)                                  cgcCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAAc                                                                                                                         <  5:142447/147‑1 (MQ=255)                                   gcCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAAccc                                                                                                                       >  7:169202/1‑148 (MQ=255)                                      aTCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATc                                                                                                                   <  2:126516/149‑1 (MQ=255)                                         cGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGtt                                                                                                                <  2:261525/149‑1 (MQ=255)                                          ggggCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTg                                                                                                               <  3:197822/149‑1 (MQ=255)                                              cTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCAc                                                                                                           >  4:329309/1‑149 (MQ=255)                                                aCGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCg                                                                                                         >  5:110154/1‑149 (MQ=255)                                                aCGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTCCCCGCAAAACTCATTGTCTTGCGCGGTCTTGAGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGAACCg                                                                                                         >  8:1642/1‑149 (MQ=255)                                                    cTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCtt                                                                                                     >  3:108008/1‑149 (MQ=255)                                                    cTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCtt                                                                                                     >  3:305572/1‑149 (MQ=255)                                                     tATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTTGCCGCGAATGGAGCCACCCCATCGTTGGCACCCGCTTc                                                                                                    >  2:151356/1‑149 (MQ=255)                                                     tATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTc                                                                                                    >  7:203840/1‑149 (MQ=255)                                                      aTCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCg                                                                                                   >  3:359210/1‑149 (MQ=255)                                                      aTCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCg                                                                                                   >  4:270594/1‑149 (MQ=255)                                                         gCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTtgtg                                                                                                                                                        <  5:128124/95‑1 (MQ=255)                                                         gCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTtgtg                                                                                                                                                        >  6:128124/1‑95 (MQ=255)                                                         gCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCg                                                                                                <  8:101496/149‑1 (MQ=255)                                                          cTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCTCCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCTGTCTTGTGGGAGCGG‑‑GCGTGCCGGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCgg                                                                                               <  7:267944/149‑1 (MQ=255)                                                          cTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCgg                                                                                               <  4:193110/149‑1 (MQ=255)                                                             ggCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGgt                                                                                              <  8:339070/147‑1 (MQ=255)                                                             ggCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCGAAGCCGgtgc                                                                                            <  8:321467/149‑2 (MQ=255)                                                             cgCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGgt                                                                                              <  8:121307/146‑1 (MQ=255)                                                              agcaggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGtt                                                                                           <  5:211428‑M1/63‑1 (MQ=255)                                                                gAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑cg                                                                                      <  8:46696/149‑1 (MQ=255)                                                                  ggatccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑cgcg                                                                                    >  2:330284‑M1/83‑149 (MQ=255)                                                                  gcggcgCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGACACCGGCGAAGCCGgtgccaacg                                                                                       <  8:177092/149‑7 (MQ=255)                                                                    atccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCggg                                                                                  >  3:288756‑M1/81‑149 (MQ=255)                                                                    atccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCggg                                                                                  >  1:5289‑M1/81‑149 (MQ=255)                                                                     tccagaacagacgggcgatatgtggcatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGc                                                                                 >  6:211428‑M1/80‑149 (MQ=255)                                                                      ccagaacagacgggcgatatgtgggatggccggagattacgcgctcggccggtgtacggtaaaggcatgcattatcgaTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGc                                                                                 >  3:25781‑M1/79‑148 (MQ=255)                                                                         aaGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGc                                                                             <  7:13352/149‑1 (MQ=255)                                                                               atCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGGCCGCGAAGACCGCAACCCGAAGGGTGGCCCCCGGGTCGCCGGTGTT‑‑‑AGCGGGGccgcccgcga                                                                       >  8:297558/1‑147 (MQ=255)                                                                                tCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGccc                                                                           >  5:58333/1‑144 (MQ=255)                                                                                tCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGccc                                                                           <  6:58333/144‑1 (MQ=255)                                                                                  gAGGCGCATCTGCTGCGATCCCCCCAAGCCTGATGTGCCCACAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTcccc                                                                    >  6:135517/1‑148 (MQ=255)                                                                                  gAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTccc                                                                     <  6:373734/148‑1 (MQ=255)                                                                                  gAGGCGCATCTGCTGCGATCCACCCAAGCCGGATGTGCCCGCAAACCTCATTGTCTGGCGCGGGCTTGTGGCAGCGG‑‑GCGGGCCCGCGAAGAGAGCAACCCGATCGTTGCCACCGGCTGCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCca                                                                    <  3:119759/149‑1 (MQ=37)                                                                                  gAGGCGCATCTGCTGCGATCCACCCAAGCCGGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTccc                                                                     <  5:12764/148‑1 (MQ=255)                                                                                      cgcATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATc                                                                <  8:176791/149‑1 (MQ=255)                                                                                      cgcATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATc                                                                <  5:308098/149‑1 (MQ=255)                                                                                       gcATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCg                                                                                                <  7:208808/119‑1 (MQ=255)                                                                                       gcATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCg                                                                                                >  8:208808/1‑119 (MQ=255)                                                                                           ctgctgCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATaa                                                           >  7:181842/1‑149 (MQ=255)                                                                                              ctggGAGCCACCCAACCTTCATGGGCCCCCAAACGTCATTGTCTTGCGGGGACTGGTGGGCGCGG‑‑GCGTCCCGGCCAATACAGCAACCCGCTCGTTGGCACCGGCTTCGCCGGTGTG‑‑‑GGCGTGCACGCCCTCTCCCACATCGATAat                                                          <  4:104550/147‑1 (MQ=255)                                                                                              ctgcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAatgc                                                        <  6:110154/149‑1 (MQ=255)                                                                                                gcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑c                                                                                       >  7:103679/1‑116 (MQ=255)                                                                                                gcGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑c                                                                                       <  8:103679/116‑1 (MQ=255)                                                                                                  gATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAatgcatgc                                                    <  8:203840/149‑1 (MQ=255)                                                                                                      cACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTGGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCtt                                                 <  7:226279/148‑1 (MQ=255)                                                                                                       aCCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCCCATCGATAATGCATGCCTTTa                                               >  3:119237/1‑149 (MQ=255)                                                                                                        cccAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTAc                                              <  8:169202/149‑1 (MQ=255)                                                                                                         ccAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGATGGGAGCGGGCACGCCCGCTGCCACATCGATAATGCATGCCtt                                                 >  1:125534/1‑148 (MQ=38)                                                                                                                     tgCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGcc                                  <  4:356737/148‑1 (MQ=255)                                                                                                                       cccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGa                                <  4:305572/148‑1 (MQ=255)                                                                                                                       cccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGa                                <  4:108008/148‑1 (MQ=255)                                                                                                                        ccGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAgc                              <  3:329309/149‑1 (MQ=255)                                                                                                                         cGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTTCCCGCGAAGAGAGCAAACCGATCGTTGGCACCCGCTTAGCCGGTTTT‑‑‑AGCGGGCACCCCCCCGACCAAATCGATAATTCATGCCGTTAACCTACACCGGccccgc                              >  4:105769/1‑144 (MQ=255)                                                                                                                         cGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGcc                                  <  3:105769/144‑1 (MQ=255)                                                                                                                          gCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑AGCGGGCACGCCCGCTGCCACAAAGATAATGCATTCCTTTACCGTAAACCGGCCGAgcgc                            >  2:217026/1‑149 (MQ=37)                                                                                                                             aaaCTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTa                         <  8:181842/149‑1 (MQ=255)                                                                                                                                   aTTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTcc                   >  8:182985/1‑149 (MQ=255)                                                                                                                                    ttGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGCTCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCg                  <  7:1642/149‑1 (MQ=255)                                                                                                                                         ttGCGCGGTCTTGTGGGAGCGG‑‑GCGTGGCCCCGCAGCGAGGAAACCGATCGGTTGCACCCGCGTAGCCCGGGTT‑‑‑AGCGGGCCCGCCCCCAGCCCCCGCGCAAAAGACTGCCGTTAACGTAAACCCGCCGCGCGCGGAATCAACGGCCAt             >  8:305160/1‑149 (MQ=255)                                                                                                                                            cgcgGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGACCAACCGGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGc           <  7:297558/148‑1 (MQ=255)                                                                                                                                              cgGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCcac        <  3:270594/149‑1 (MQ=255)                                                                                                                                                    TGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCg  <  5:350328‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                          CACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGG‑‑GCGTGCCCGCGAAGAGAGCAACCCGATCGTTGGCACCGGCTTCGCCGGTGTT‑‑‑CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCG  >  NC_002947/5671468‑5671763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.