New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6056495	70 (1.160)	3 (0.050)	3/256	NT	4.6%	coding (622/927 nt)	oxyR	oxidative and nitrosative stress transcriptional dual regulator
	?	NC_002947	= 6056520	56 (0.970)					coding (647/927 nt)	oxyR	oxidative and nitrosative stress transcriptional dual regulator
Rejected: Frequency below/above cutoff threshold.

CGCTATACGATGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATG  >  NC_002947/6056349‑6056636                                                                                                                                                   |                                                                                                                                                cGCTATACGATGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGc                                                                                                                                               >  1:142729/1‑149 (MQ=255)    tataCGATGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCGTGccc                                                                                                                                             >  8:147009/1‑148 (MQ=255)      taCGATGGACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTAc                                                                                                                                          <  2:280923/149‑1 (MQ=255)          aTGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGcc                                                                                                                                              <  1:199066/141‑1 (MQ=255)          aTGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGcc                                                                                                                                              >  2:199066/1‑141 (MQ=255)             aaCCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGaa                                                                                                                                    <  6:181558/148‑1 (MQ=255)             aaCCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAAc                                                                                                                                   <  2:322665/149‑1 (MQ=255)              aCCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAAc                                                                                                                                   <  5:102371/148‑1 (MQ=255)               ccGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAAc                                                                                                                                   >  8:44505/1‑147 (MQ=255)               ccGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAAc                                                                                                                                   >  2:74910/1‑147 (MQ=255)                cGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAg                                                                                                                                >  1:315474/1‑149 (MQ=255)                 gTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAgg                                                                                                                               <  8:192302/149‑1 (MQ=255)                  ttCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAggg                                                                                                                              >  3:294441/1‑149 (MQ=255)                       cgcCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAggggg                                                                                                                            <  5:16491/146‑1 (MQ=255)                       cgcCCTGATGCCTGCCGACCACCCACGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGt                                                                                                                          <  8:114368/148‑1 (MQ=255)                          ccTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACCGGAAGCCTGc                                                                                                                                               <  6:166708/124‑1 (MQ=255)                          ccTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACCGGAAGCCTGc                                                                                                                                               >  5:166708/1‑124 (MQ=255)                              aTGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAaggct                                                                                                                   >  2:142729‑M2/1‑143 (MQ=255)                               tgcctgccGACCCCCCATGGACGGCGAAAAACACCCTCGACACCGCCATGCTCAATGACCAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTtcaccccccttgttcagggtagggcaggcttc                                                                                                                 <  6:186597‑M1/149‑33 (MQ=255)                                gcctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGaa                                                                                                                                    >  6:381533/1‑129 (MQ=255)                                gcctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGaa                                                                                                                                    <  5:381533/129‑1 (MQ=255)                                 ggttgcgacgaCCCTTGGACGGCGAAAACGACCATCGACTCCGCCATGCTCTATGACATGAGCGTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAg                                                                                                               <  7:233709/144‑1 (MQ=255)                                 cctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCaa                                                                                                                <  4:294441/148‑1 (MQ=255)                                 cctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCaa                                                                                                                <  8:323473/148‑1 (MQ=255)                                 cctgccGACCACCCATCGACGGCGAAAAAGACCATCGACACCTCCATGCTCAATGACAAGAGCCTGTTGATGCTTTGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGGTCaa                                                                                                                <  6:82649/148‑1 (MQ=255)                                  ctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTtcaccccccttgttcagggtagggcaggcttcca                                                                                                               <  5:133944‑M1/148‑35 (MQ=255)                                  ctgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTtcaccccccttgttcagggtagggcaggcttc                                                                                                                 >  6:133944‑M1/1‑114 (MQ=255)                                   tgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAgg                                                                                                              >  5:380349/1‑148 (MQ=255)                                   tgccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCGGTGGCAGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGc                                                                                                             >  2:221129/1‑149 (MQ=255)                                     ccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGc                                                                                                             <  7:44505/147‑1 (MQ=255)                                     ccGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGATGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGca                                                                                                            >  1:46644/1‑148 (MQ=255)                                            cccATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACgg                                                                                                    <  7:147009/149‑1 (MQ=255)                                            cccATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACgg                                                                                                    >  6:326111/1‑149 (MQ=255)                                             ccATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGt                                                                                                   >  3:237059/1‑149 (MQ=255)                                              cATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTc                                                                                                  <  4:237059/149‑1 (MQ=255)                                                   aCGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTc                                                                                             >  8:275693/1‑149 (MQ=255)                                                     ggCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTc                                                                                             >  5:171292/1‑147 (MQ=255)                                                      gCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAg                                                                                          <  3:188835/149‑1 (MQ=255)                                                        gAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCt                                                                                        >  2:66573/1‑149 (MQ=255)                                                           aaaGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAc                                                                                    <  4:330913/149‑1 (MQ=255)                                                           aaaGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAc                                                                                    <  2:315474/149‑1 (MQ=255)                                                             aGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CCC‑Tg                                                                                 >  6:20615/1‑149 (MQ=255)                                                             aGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑Tg                                                                                 <  5:5743/149‑1 (MQ=255)                                                                ccATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGaa                                                                              <  1:74910/149‑1 (MQ=255)                                                                 cATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGaac                                                                             >  5:109335/1‑148 (MQ=255)                                                                 cATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGaaa                                                                             >  3:368813/1‑149 (MQ=255)                                                                 cATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCCGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGaaa                                                                             >  5:184289/1‑149 (MQ=255)                                                                                gCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCT                                                                                                                                                 >  3:256781‑M1/1‑68 (MQ=255)                                                                                gCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCT                                                                                                                                                 <  4:256781‑M1/68‑1 (MQ=255)                                                                                gCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGCGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGCCACAtgg                                                              >  1:227133/1‑149 (MQ=255)                                                                                 cTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACAtgg                                                              <  6:171292/148‑1 (MQ=255)                                                                                    aaTGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGc                                                          >  8:249329/1‑149 (MQ=255)                                                                                    aaTGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCAACCGTCACATGGTGGc                                                          >  7:162613/1‑149 (MQ=255)                                                                                         cAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCg                                                     <  6:380349/149‑1 (MQ=255)                                                                                         cAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCg                                                     >  5:81010/1‑149 (MQ=255)                                                                                          aaGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCgg                                                    >  1:218978/1‑149 (MQ=255)                                                                                               ccTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTg                                               >  6:36390/1‑149 (MQ=255)                                                                                                       tgctTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATc                                        >  7:114510/1‑148 (MQ=255)                                                                                                       tgctTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACAATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATc                                        >  2:111870/1‑148 (MQ=255)                                                                                                       tgctTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAAGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATc                                        >  8:34242/1‑148 (MQ=255)                                                                                                              tGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACAtggt                                                             >  5:203391/1‑120 (MQ=255)                                                                                                              tGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACAtggt                                                             <  6:203391/120‑1 (MQ=255)                                                                                                                aGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGcc                               <  2:218978/148‑1 (MQ=255)                                                                                                                aGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCg                              <  6:81010/149‑1 (MQ=255)                                                                                                                 gggCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGc                             >  5:23849/1‑149 (MQ=255)                                                                                                                     cACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTc                         <  1:221129/149‑1 (MQ=255)                                                                                                                          cTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAg                    >  4:230248/1‑149 (MQ=255)                                                                                                                          cTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAg                    >  3:305720/1‑149 (MQ=255)                                                                                                                           ttCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGt                   >  6:266228/1‑149 (MQ=255)                                                                                                                           ttCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGt                   >  4:171339/1‑149 (MQ=255)                                                                                                                              cGTGACCAGGTTCTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCTACGCTTGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTg                  <  1:111870/149‑1 (MQ=255)                                                                                                                               gTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGcac               <  7:275693/149‑1 (MQ=255)                                                                                                                               gTGACAAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGca                >  2:88558/1‑148 (MQ=255)                                                                                                                                tGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGcaca              <  4:368813/149‑1 (MQ=255)                                                                                                                                       gTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCTGCAGTGCACAGccacca       <  1:66573/149‑1 (MQ=255)                                                                                                                                       gTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGcaca              <  6:128104/142‑1 (MQ=255)                                                                                                                                       gTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGcaca              >  5:128104/1‑142 (MQ=255)                                                                                                                                         aCTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCcaccac      >  2:80732/1‑148 (MQ=255)                                                                                                                                           tGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAaggcttccagtacctggtcacggaagcagtggccctcaccaagcagcaacaggctcttgtcattgagcatggcggtgtcgatggtctttttcgccgtccatgggtggtcggcag      <  5:133944‑M2/148‑115 (MQ=255)                                                                                                                                            ggAATCCTGCCCTACCCTTAACAAGGGTGTTGAAGGCTCAAGGCACACCACGGTCGATTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTg                  <  7:235228/133‑1 (MQ=255)                                                                                                                                            ggAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCcaccac      >  7:24684/1‑145 (MQ=255)                                                                                                                                            ggAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCcaccac      <  8:24684/145‑1 (MQ=255)                                                                                                                                            ggAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATg  >  6:284366/1‑149 (MQ=255)                                                                                                                                             gAAGCCTGCCCTACCCTGAACAAGGGGGGTGAaggcttccagtacctggtcacggaagcagtggccctcaccaagcagcaacaggctcttgtcattgagcatggcggtgtcgatggtctttttcgccgtccatgggtggtcggcag      >  6:133944‑M2/1‑32 (MQ=255)                                                                                                                                             gAAGCCTGCCCTACCCTGAACAAGGGGGGTGAaggcttccagtacctggtcacggaagcagtggccctcaccaagcagcaacaggctctggtcattgagcatggcggtgtcgagggtgtttttcgccgtccatggggggtcggcaggca   <  6:186597‑M2/149‑118 (MQ=255)                                                                                                                                               aGCCTtcaccccccttgttcagggtagggcaggcttccagtacctggtcacggaagcagtggccctcaccaagcagcaacaggctcttgtcattgagcatggcggtgtcgatggtctttttcgccgtccatgggtggtcggcaggcat  >  2:142729‑M1/1‑5 (MQ=255)                                                                                                                                                gCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGC‑TCCGGCCTTgg                                              >  8:295490/1‑100 (MQ=255)                                                                                                                                                gCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGC‑TCCGGCCTTgg                                              <  7:295490/100‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                CGCTATACGATGAACCGTTCTGCGCCCTGATGCCTGCCGACCACCCATGGACGGCGAAAAAGACCATCGACACCGCCATGCTCAATGACAAGAGCCTGTTGCTGCTTGGTGAGGGCCACTGCTTCCGTGACCAGGTACTGGAAGCCTGCCCTACCCTGAACAAGGGGGGTGAAGGCTCAAGGCACACCACGGTCGAGTCCAGCT‑CAC‑TGGAAACCATCCGTCACATGGTGGCTTCCGGCCTTGGCGTATCGATCTTGCCGCTGTCGGCAGTGCACAGCCACCACTATG  >  NC_002947/6056349‑6056636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.