New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1440000 =NA (NA)39 (0.670) 37/256 NT 100% intergenic (‑331/‑328) yveA/PP_1260 aspartate‑proton symporter/transposase
?NC_002947 = 1844451 0 (0.000)coding (343/2754 nt) gacS sensor protein GacS

Only 100 of 137 total aligned reads displayed.

GCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGC  >  NC_002947/1844304‑1844599
                                                                                                                                                    |                                                                                                                                                    
ttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggcttttcttctcaaagcccggaaacaggggtatcaactggtggccgcttgagggcttagaaaacaagtgggtggattttgttttatgagag                                                                                                                                                      >  5:380295‑M2/147‑149 (MQ=255)
gcagcGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGa                                                                                                                                                     >  2:321726‑M2/1‑148 (MQ=255)
  atcttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGtt                                                                                                                                                    <  5:216768‑M2/5‑1 (MQ=255)
       gaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTg                                                                                                                                               >  8:254246‑M2/140‑149 (MQ=255)
        aacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGc                                                                                                                                              >  6:159169‑M2/139‑149 (MQ=255)
         acaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggcgtttcgtggcaaagcccggcaactggggtatgaactgggggccgcttggggggttagaaaacaatgggttggatttttgttgatgaGAGTTGGGTg                                                                                                                                               >  2:100590‑M2/138‑147 (MQ=255)
          caaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCg                                                                                                                                            <  2:5757‑M2/13‑1 (MQ=255)
             ggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGGCGGTa                                                                                                                                         >  7:270735‑M2/134‑149 (MQ=255)
                     ggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACcgccgc                                                                                                                                  <  7:254246‑M2/23‑1 (MQ=255)
                      cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgc                                                                                                                               >  1:100060‑M2/1‑126 (MQ=255)
                      cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAG                                                                                                                                                      >  3:60561‑M2/1‑126 (MQ=255)
                       tCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcg                                                                                                                              <  8:38110‑M2/149‑25 (MQ=255)
                        gttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTgg                                                                                                                                                  <  5:338820‑M2/7‑1 (MQ=255)
                         gATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTAGCGCTGCAGGAGatcacccagcccttccgggctgc                                                                                                                               >  1:243940‑M2/1‑124 (MQ=255)
                                 cccagcccagCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcg                                                                                                                      <  4:250339‑M2/147‑33 (MQ=255)
                                 cccagcccagCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgc                                                                                                                       >  6:344125‑M2/1‑115 (MQ=255)
                                 cagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGAtt                                                                                                                     <  5:97132‑M2/36‑1 (MQ=255)
                                 cagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGAtt                                                                                                                     >  5:274458‑M2/114‑149 (MQ=255)
                                     agccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGc                                                                                                                 <  4:187025‑M2/40‑1 (MQ=255)
                                     agccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGc                                                                                                                 <  3:160366‑M2/40‑1 (MQ=255)
                                       ccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaa                                                                                                               <  8:274540‑M2/148‑40 (MQ=255)
                                         aagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGc                                                                                                             <  4:337377‑M2/44‑1 (MQ=255)
                                              gcgcTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggt                                                                                                       <  1:338042‑M2/149‑48 (MQ=255)
                                              cggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTaccggcgcgg                                                                                                                                >  8:87264‑M2/101‑123 (MQ=255)
                                                   cGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacg                                                                                                  <  4:20148‑M2/149‑53 (MQ=255)
                                                    tgcTTCGGCCGTAACGTAGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgta                                                                                                    >  6:260000‑M2/2‑96 (MQ=255)
                                                    gtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCg                                                                                                  <  3:168887‑M2/55‑1 (MQ=255)
                                                     tccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGt                                                                                                 >  5:70315‑M2/94‑149 (MQ=255)
                                                     gCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggc                                                                                                >  2:112558‑M2/1‑95 (MQ=255)
                                                       cgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                               <  6:274458‑M2/58‑1 (MQ=255)
                                                       cgggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                               >  4:113802‑M2/92‑149 (MQ=255)
                                                       cgggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                               >  6:141315‑M2/92‑149 (MQ=255)
                                                        gggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTggg                                                                                              >  4:37257‑M2/91‑149 (MQ=255)
                                                          ggccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttca                                                                                            >  3:20148‑M2/1‑90 (MQ=255)
                                                           ctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCa                                                                                           <  2:265585‑M2/62‑1 (MQ=255)
                                                               gcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGgcg                                                                                       >  4:242503‑M2/84‑149 (MQ=255)
                                                                 ttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGcgcg                                                                                     >  7:301048‑M2/82‑149 (MQ=255)
                                                                 ttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGcgcg                                                                                     >  3:171127‑M2/82‑149 (MQ=255)
                                                                       aagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGt                                                                               <  3:37257‑M2/74‑1 (MQ=255)
                                                                          gcccggaaactggggtatcaactggtggccgcttgagtgctagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCg                                                                            <  1:279120‑M2/77‑1 (MQ=255)
                                                                           ccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCgg                                                                           <  5:141315‑M2/78‑1 (MQ=255)
                                                                             ggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCgggg                                                                         <  3:242503‑M2/80‑1 (MQ=255)
                                                                              gaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGc                                                                        <  7:123718‑M2/81‑1 (MQ=255)
                                                                              gaaactggggtatcaactgggggccgcctgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGGGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGc                                                                        <  7:308226‑M2/81‑1 (MQ=255)
                                                                               cAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacatt                                                                      <  8:116971‑M2/149‑81 (MQ=255)
                                                                                  gTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttg                                                                   >  4:38643‑M2/1‑66 (MQ=255)
                                                                                     gcgGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaa                                                                 <  8:273203‑M2/148‑86 (MQ=255)
                                                                                       gtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGc                                                               >  3:261650‑M2/60‑149 (MQ=255)
                                                                                       ggtggtGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaa                                                              >  7:116971‑M2/1‑61 (MQ=255)
                                                                                               ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggc                                                      >  5:3684‑M2/1‑53 (MQ=255)
                                                                                               ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttaagttccccagcgacgctgacattttgaaaaacaaaaagc                                                      <  3:198023‑M2/149‑97 (MQ=255)
                                                                                                 gtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTgcgcgc                                                     <  5:50928‑M2/100‑1 (MQ=255)
                                                                                                 gAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcgg                                                    <  5:230455‑M2/149‑99 (MQ=255)
                                                                                                    aaCTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttg                                                 >  8:95039‑M2/1‑48 (MQ=255)
                                                                                                     ccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGTCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACAt                                                 <  1:101547‑M2/104‑1 (MQ=255)
                                                                                                            tCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccgg                                           <  4:235033‑M2/147‑108 (MQ=255)
                                                                                                              tgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCt                                        >  3:367997‑M2/37‑149 (MQ=255)
                                                                                                               ggTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtaggg                                      >  2:338042‑M2/1‑37 (MQ=255)
                                                                                                                gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggc                                     <  7:270905‑M2/149‑114 (MQ=255)
                                                                                                                cttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTc                                       >  3:181943‑M2/35‑148 (MQ=255)
                                                                                                                cttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTc                                       <  4:171127‑M2/114‑1 (MQ=255)
                                                                                                                 ttagaaaacaatgggttgcattttgtttgatgaGAGTTGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAg                                    >  8:247479‑M2/34‑149 (MQ=255)
                                                                                                                 ttagaaaacaatgggttgcattttgtttgatgaGAGTTGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAg                                    >  8:247477‑M2/34‑149 (MQ=255)
                                                                                                                     gggTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagcc                                <  2:317253‑M2/149‑119 (MQ=255)
                                                                                                                       aacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGttt                               <  2:366495‑M2/122‑1 (MQ=255)
                                                                                                                         caatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTtgt                             <  8:308519‑M2/124‑1 (MQ=255)
                                                                                                                           atgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGc                           <  1:100590‑M2/126‑1 (MQ=255)
                                                                                                                            gtcgtTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggagtaaggcgtcagttcagcagcgccgctgacagtttgtaaaagaaaaggcggttggcgcggtagggccagcggccgttt                         <  1:302457‑M2/149‑126 (MQ=255)
                                                                                                                             tcgtTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttg                        >  8:270905‑M2/1‑23 (MQ=255)
                                                                                                                              cgtTGCCACTGCGCTGCAGGAGatcaccctgcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgc                       >  7:38110‑M2/1‑22 (MQ=255)
                                                                                                                                ttGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctt                     >  4:313724‑M2/1‑20 (MQ=255)
                                                                                                                                  gcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAAtt                    >  1:75849‑M2/17‑149 (MQ=255)
                                                                                                                                  gCCACTGCGCTGCAGGAGatcacccaccccttcctggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgcttt                    >  6:197664‑M2/1‑18 (MQ=255)
                                                                                                                                    cACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcaggtacgcagcgccgctggcaatttgtaaaataaaaggcggttggcccggtagggccagccgcggtttgctttgt                  <  4:4479‑M2/148‑133 (MQ=255)
                                                                                                                                    attttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATtct                  >  1:83801‑M2/15‑149 (MQ=255)
                                                                                                                                          tttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAg            >  2:3159‑M2/9‑149 (MQ=255)
                                                                                                                                             gatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTg         >  1:97736‑M2/6‑149 (MQ=255)
                                                                                                                                               cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtg       >  5:103058‑M2/1‑6 (MQ=255)
                                                                                                                                               cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagg              >  8:3614‑M2/1‑6 (MQ=255)
                                                                                                                                               cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagg              <  7:3614‑M2/142‑137 (MQ=255)
                                                                                                                                                aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt      <  4:76829‑M2/149‑145 (MQ=255)
                                                                                                                                                aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt      <  7:25706‑M2/149‑145 (MQ=255)
                                                                                                                                                 ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtg     <  5:367352‑M2/149‑146 (MQ=255)
                                                                                                                                                 ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt      >  7:280371‑M2/1‑4 (MQ=255)
                                                                                                                                                 cgagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt      >  1:191665‑M2/2‑4 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgccgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccgttttctttgttagggttggtgtgc    <  6:38170‑M2/149‑147 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttggtttgttagggttcgtgtgc    <  3:337357‑M2/149‑147 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc    <  7:183922‑M2/149‑147 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc    <  5:228815‑M2/149‑147 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc    <  5:339093‑M2/149‑147 (MQ=255)
                                                                                                                                                  gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt      >  8:266955‑M2/1‑3 (MQ=255)
                                                                                                                                                   agatcacccagcccttccgggctgcgctgtcgcgcaggcaaacatgaggtgtacggcttcagttccccagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc   <  1:254569‑M2/149‑148 (MQ=255)
                                                                                                                                                   agatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcg   <  2:234871‑M2/149‑148 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc  <  3:269666‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc  <  3:142635‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc  <  2:232249‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc  <  7:105363‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc  <  5:283548‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgggtgcgc  <  5:320786‑M2/149‑149 (MQ=255)
                                                                                                                                                    gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgcttt                    >  7:87166‑M2/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGC  >  NC_002947/1844304‑1844599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.