New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1441693NA (NA)56 (0.950) 46/260 NT 100% intergenic (+37/+395) PP_1260/ghrB transposase/2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase
?NC_002947 1844449 = 0 (0.000)coding (345/2754 nt) gacS sensor protein GacS

Only 100 of 132 total aligned reads displayed.

CAGCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAG  >  NC_002947/1844302‑1844597
                                                                                                                                                    |                                                                                                                                                    
gcttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgag                                                                                                                                                      <  2:298300‑M2/1‑1 (MQ=255)
 gttctgttgaacaaggtcttgaggagttcgaacccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga                                                                                                                                                     <  5:211499‑M2/2‑1 (MQ=255)
 cttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga                                                                                                                                                     <  1:225545‑M2/2‑1 (MQ=255)
  gcagcGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGa                                                                                                                                                   >  2:321726‑M2/1‑148 (MQ=255)
    atgtttaacaaggtcttgaggagttagaaaccagaagccaagaccggcagttccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga                                                                                                                                                     <  5:191577‑M2/2‑1 (MQ=255)
    atcttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGtt                                                                                                                                                  <  5:216768‑M2/5‑1 (MQ=255)
          aacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGc                                                                                                                                            >  6:159169‑M2/139‑149 (MQ=255)
            caaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCg                                                                                                                                          <  2:5757‑M2/13‑1 (MQ=255)
               ggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGGCGGTa                                                                                                                                       >  7:270735‑M2/134‑149 (MQ=255)
                  cGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcccccagcccttccg                                                                                                                                   <  3:194379‑M2/149‑18 (MQ=255)
                     cAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggc                                                                                                                                <  5:344125‑M2/149‑21 (MQ=255)
                       ggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACcgccgc                                                                                                                                <  7:254246‑M2/23‑1 (MQ=255)
                        cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgc                                                                                                                             >  1:100060‑M2/1‑126 (MQ=255)
                        cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAG                                                                                                                                                    >  3:60561‑M2/1‑126 (MQ=255)
                        cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAG                                                                                                                                                    <  4:60561‑M2/126‑1 (MQ=255)
                         tCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcg                                                                                                                            <  8:38110‑M2/149‑25 (MQ=255)
                          gttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTgg                                                                                                                                                <  5:338820‑M2/7‑1 (MQ=255)
                           gATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTAGCGCTGCAGGAGatcacccagcccttccgggctgc                                                                                                                             >  1:243940‑M2/1‑124 (MQ=255)
                                   cccagcccagCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcg                                                                                                                    <  4:250339‑M2/147‑33 (MQ=255)
                                   cccagcccagCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgc                                                                                                                     >  6:344125‑M2/1‑115 (MQ=255)
                                   cagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGAtt                                                                                                                   >  5:274458‑M2/114‑149 (MQ=255)
                                   cagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGAtt                                                                                                                   <  5:97132‑M2/36‑1 (MQ=255)
                                     cagcccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGAGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcag                                                                                                                 <  4:268377‑M2/148‑36 (MQ=255)
                                       agccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGc                                                                                                               <  4:187025‑M2/40‑1 (MQ=255)
                                       agccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGc                                                                                                               <  3:160366‑M2/40‑1 (MQ=255)
                                         ccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaa                                                                                                             <  8:274540‑M2/148‑40 (MQ=255)
                                           aagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGc                                                                                                           <  4:337377‑M2/44‑1 (MQ=255)
                                                gcgcTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggt                                                                                                     <  1:338042‑M2/149‑48 (MQ=255)
                                                cggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTaccggcgcgg                                                                                                                              >  8:87264‑M2/101‑123 (MQ=255)
                                                cggcaggtccgggctttgctgcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaactatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTg                                                                                                                              <  7:87264‑M2/25‑1 (MQ=255)
                                                   cTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtg                                                                                                    <  5:43574‑M2/147‑49 (MQ=255)
                                                    aggtccgggctttgcttcgcaaagcccggaaactggggtagcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCgg                                                                                                  <  8:253326‑M2/53‑1 (MQ=255)
                                                     cGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacg                                                                                                <  4:20148‑M2/149‑53 (MQ=255)
                                                      tgcTTCGGCCGTAACGTAGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgta                                                                                                  >  6:260000‑M2/2‑96 (MQ=255)
                                                       tccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGt                                                                                               >  5:70315‑M2/94‑149 (MQ=255)
                                                       gCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggc                                                                                              >  2:112558‑M2/1‑95 (MQ=255)
                                                         cgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                             <  6:274458‑M2/58‑1 (MQ=255)
                                                         cgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                             <  5:159169‑M2/58‑1 (MQ=255)
                                                         cgggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                             >  4:113802‑M2/92‑149 (MQ=255)
                                                         cgggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTgg                                                                                             >  6:141315‑M2/92‑149 (MQ=255)
                                                          gggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTggg                                                                                            >  4:37257‑M2/91‑149 (MQ=255)
                                                             ctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCa                                                                                         <  2:265585‑M2/62‑1 (MQ=255)
                                                                 gcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGgcg                                                                                     >  4:242503‑M2/84‑149 (MQ=255)
                                                                   ttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGcgcg                                                                                   >  7:301048‑M2/82‑149 (MQ=255)
                                                                   ttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGcgcg                                                                                   >  3:171127‑M2/82‑149 (MQ=255)
                                                                         aagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGt                                                                             <  3:37257‑M2/74‑1 (MQ=255)
                                                                             ccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCgg                                                                         <  5:141315‑M2/78‑1 (MQ=255)
                                                                               ggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCgggg                                                                       <  3:242503‑M2/80‑1 (MQ=255)
                                                                                gaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGc                                                                      <  8:301048‑M2/81‑1 (MQ=255)
                                                                                gaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGc                                                                      <  7:123718‑M2/81‑1 (MQ=255)
                                                                                gaaactggggtatcaactgggggccgcctgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGGGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGc                                                                      <  7:308226‑M2/81‑1 (MQ=255)
                                                                                ccAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttaagttccgcagcgacgctgacat                                                                     <  4:203427‑M2/149‑80 (MQ=255)
                                                                                         gtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGc                                                             >  3:261650‑M2/60‑149 (MQ=255)
                                                                                                 ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggc                                                    >  5:3684‑M2/1‑53 (MQ=255)
                                                                                                 ccGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttaagttccccagcgacgctgacattttgaaaaacaaaaagc                                                    <  3:198023‑M2/149‑97 (MQ=255)
                                                                                                   gtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTgcgcgc                                                   <  5:50928‑M2/100‑1 (MQ=255)
                                                                                                   gAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcgg                                                  <  5:230455‑M2/149‑99 (MQ=255)
                                                                                                    tggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGca                                                  >  1:366495‑M2/49‑149 (MQ=255)
                                                                                                      aaCTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttg                                               >  8:95039‑M2/1‑48 (MQ=255)
                                                                                                       ccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGTCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACAt                                               <  1:101547‑M2/104‑1 (MQ=255)
                                                                                                             gagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGc                                           <  3:236387‑M2/108‑1 (MQ=255)
                                                                                                               gtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGc                                       >  5:307543‑M2/38‑149 (MQ=255)
                                                                                                                tgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCt                                      >  3:367997‑M2/37‑149 (MQ=255)
                                                                                                                 ggTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtaggg                                    >  2:338042‑M2/1‑37 (MQ=255)
                                                                                                                  gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggc                                   <  1:146375‑M2/149‑114 (MQ=255)
                                                                                                                  gTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggc                                   <  7:270905‑M2/149‑114 (MQ=255)
                                                                                                                  cttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTc                                     >  3:181943‑M2/35‑148 (MQ=255)
                                                                                                                   ttagaaaacaatgggttgcattttgtttgatgaGAGTTGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAg                                  >  8:247479‑M2/34‑149 (MQ=255)
                                                                                                                   ttagaaaacaatgggttgcattttgtttgatgaGAGTTGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAg                                  >  8:247477‑M2/34‑149 (MQ=255)
                                                                                                                      gaaaacaatgggtttcattttgtttgatgaGCGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAgg                                 <  6:88234‑M2/118‑1 (MQ=255)
                                                                                                                       gggTGGCGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagcc                              <  2:317253‑M2/149‑119 (MQ=255)
                                                                                                                         aacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGttt                             <  2:366495‑M2/122‑1 (MQ=255)
                                                                                                                           caatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTtgt                           <  8:308519‑M2/124‑1 (MQ=255)
                                                                                                                           caatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTtgt                           <  8:270735‑M2/124‑1 (MQ=255)
                                                                                                                             atgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGc                         <  1:100590‑M2/126‑1 (MQ=255)
                                                                                                                             atgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGc                         <  1:95529‑M2/126‑1 (MQ=255)
                                                                                                                              gtcgtTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggagtaaggcgtcagttcagcagcgccgctgacagtttgtaaaagaaaaggcggttggcgcggtagggccagcggccgttt                       <  1:302457‑M2/149‑126 (MQ=255)
                                                                                                                               tcgtTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttg                      >  8:270905‑M2/1‑23 (MQ=255)
                                                                                                                                cgtTGCCACTGCGCTGCAGGAGatcaccctgcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgc                     >  7:38110‑M2/1‑22 (MQ=255)
                                                                                                                                    gCCACTGCGCTGCAGGAGatcacccaccccttcctggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgcttt                  >  6:197664‑M2/1‑18 (MQ=255)
                                                                                                                                      cACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcaggtacgcagcgccgctggcaatttgtaaaataaaaggcggttggcccggtagggccagccgcggtttgctttgt                <  4:4479‑M2/148‑133 (MQ=255)
                                                                                                                                      attttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATtct                >  1:83801‑M2/15‑149 (MQ=255)
                                                                                                                                            tttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAg          >  2:3159‑M2/9‑149 (MQ=255)
                                                                                                                                              cTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttc        >  2:146375‑M2/1‑9 (MQ=255)
                                                                                                                                               gatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTg       >  1:97736‑M2/6‑149 (MQ=255)
                                                                                                                                                gCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgt      <  4:120185‑M2/149‑143 (MQ=255)
                                                                                                                                                 cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtg     <  7:284012‑M2/149‑144 (MQ=255)
                                                                                                                                                 cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagg            <  7:3614‑M2/142‑137 (MQ=255)
                                                                                                                                                 cAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcggcagttacgcagcgacgctgccattttgaaaaagaaaaggcggttggcccggtagggcccgccgccttttgctttgttagggttcgtg     <  3:166017‑M2/149‑144 (MQ=255)
                                                                                                                                                  aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttgcgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt    <  7:140932‑M2/149‑145 (MQ=255)
                                                                                                                                                  aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt    <  4:76829‑M2/149‑145 (MQ=255)
                                                                                                                                                  aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt    <  4:36683‑M2/149‑145 (MQ=255)
                                                                                                                                                   ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtg   <  5:367352‑M2/149‑146 (MQ=255)
                                                                                                                                                   ggAGatcacccagcccttccgggctgcgctgtcgcgcaacaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaa                                                            >  1:273457‑M2/1‑4 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgccgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccgttttctttgttagggttggtgtgc  <  6:38170‑M2/149‑147 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttggtttgttagggttcgtgtgc  <  3:337357‑M2/149‑147 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc  <  5:228815‑M2/149‑147 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc  <  7:183922‑M2/149‑147 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt    >  8:266955‑M2/1‑3 (MQ=255)
                                                                                                                                                    gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt    <  7:266955‑M2/147‑145 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CAGCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCGTCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAG  >  NC_002947/1844302‑1844597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.