| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,975,167 | A→T | 9.2% | intergenic (+88/+19) | PP_3504 → / ← PP_3505 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,975,167 | 0 | A | T | 9.2% | 212.0 / 9.6 | 76 | intergenic (+88/+19) | PP_3504/PP_3505 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (36/33); new base T (2/5); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
AGTGCGCGCCGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTGGCGCACGGCAT > NC_002947/3975019‑3975311 | agTGCGCGCCGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACaaa < 6:301314/149‑1 (MQ=255) gcgcgcCGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAgtg > 1:290303/1‑149 (MQ=255) gcgcCGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTc < 8:239369/149‑1 (MQ=255) cGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCaa > 3:122234/1‑149 (MQ=255) cGAATTGTGTGAAAAGGGCTACGACCTGCAACCCTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaa < 7:107202/149‑1 (MQ=255) cGAATTGTCTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaa < 7:112432/149‑1 (MQ=255) aaTTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGATGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaatt < 8:69256/149‑3 (MQ=255) aTTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaattg < 2:275803/149‑4 (MQ=255) gtgtgtATAGGGCTAGGACCTGCAACCGTGGTCGATGCCGAAGTAATTTCGGCCAGCAGAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGc < 8:322008/148‑1 (MQ=255) gtgtgAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGc < 4:87624/148‑1 (MQ=255) gtgtgAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGc < 2:290303/148‑1 (MQ=255) tgtgAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGcc < 6:176165/148‑1 (MQ=255) tgAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGt > 7:300637/1‑149 (MQ=255) aaaGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGAAAATTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTc > 5:222518/1‑148 (MQ=255) aGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAAt < 1:184650/149‑1 (MQ=255) aGGGCTACGACCTGCAACCGTGGTCGATGCCGAACTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAAt > 7:103805/1‑149 (MQ=255) ggCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATc > 8:104333/1‑148 (MQ=255) cTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaattg > 5:370884/1‑131 (MQ=255) gACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTTGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCAcc > 4:23901/1‑149 (MQ=255) ccTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCt < 8:73053/149‑1 (MQ=255) ccTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCt < 2:342647/149‑1 (MQ=255) gCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaattgg < 5:131772/126‑5 (MQ=255) gCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACACTTTGTCGCaattgg > 6:131772/1‑122 (MQ=255) cAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AAt < 5:169246/149‑1 (MQ=255) cGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACGCTG‑AAttgtt < 6:362500/149‑1 (MQ=255) gTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCaa < 5:263446/149‑1 (MQ=255) gATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTg > 7:200076/1‑149 (MQ=255) ccGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTgg < 7:104333/149‑1 (MQ=255) ccGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTg < 8:103805/148‑1 (MQ=255) gAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTc < 6:177306/115‑1 (MQ=255) gAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTc > 5:177306/1‑115 (MQ=255) tAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAAt > 5:287327/1‑147 (MQ=255) atatCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGc < 2:156151/149‑1 (MQ=255) tCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCt < 6:287327/148‑1 (MQ=255) gCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATGACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCaa > 6:279134/1‑149 (MQ=255) gCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGt > 6:274055/1‑149 (MQ=255) acaaGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTTGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGc < 3:23901/149‑1 (MQ=255) aaGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGc > 4:240618/1‑147 (MQ=255) gtgcgtgcATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTCTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGa > 2:45348/1‑149 (MQ=255) gtgcATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCt > 8:307321/1‑149 (MQ=255) gtgcATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGAAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCt > 7:349911/1‑149 (MQ=255) gcATGGTCACGCACTTGTAGAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTTCCAGACGCTgc > 4:307465/1‑149 (MQ=255) tCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGt < 1:11058/149‑1 (MQ=255) tCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGt < 1:193292/149‑1 (MQ=255) aCGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTcc > 2:192596/1‑149 (MQ=255) cGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTccc < 3:239220/149‑1 (MQ=255) cGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTccc < 4:122234/149‑1 (MQ=255) gCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTcc > 5:134109/1‑147 (MQ=255) aCTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAgg < 8:200076/149‑1 (MQ=255) cTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGgc < 8:300637/149‑1 (MQ=255) gTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCa > 2:5072/1‑149 (MQ=255) tACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGAc > 8:284136/1‑127 (MQ=255) tACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGAc < 7:284136/127‑1 (MQ=255) aaCTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCt < 5:15022/117‑1 (MQ=255) aaCTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCt > 6:15022/1‑117 (MQ=255) aaCTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACggg > 8:70327/1‑149 (MQ=255) ctctGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGgcgc < 7:307321/147‑1 (MQ=255) tgttgctgttgTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCa < 6:134109/146‑1 (MQ=255) tgttgctgttgTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGtt > 4:124392/1‑149 (MQ=255) ttgctgttgTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGtt < 3:240618/147‑1 (MQ=255) tgctgttgTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTcc < 1:45348/148‑1 (MQ=255) gctgttgTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCa > 2:240053/1‑148 (MQ=255) ttgtGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATc < 7:186517/148‑1 (MQ=255) ttgtGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATc < 1:240053/148‑1 (MQ=255) gtgGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGAc > 2:365745/1‑149 (MQ=255) tgGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGAc > 2:59956/1‑148 (MQ=255) tgGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGAc > 2:186200/1‑148 (MQ=255) cAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTGAAATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACcaa > 1:288896/1‑149 (MQ=255) cAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACcaa > 4:53330/1‑148 (MQ=255) cAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACcaa > 6:373278/1‑148 (MQ=255) aaTTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTGgcg > 6:5851/1‑148 (MQ=255) aTTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCt > 1:262895/1‑73 (MQ=255) aTTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCt < 2:262895/73‑1 (MQ=255) gACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTg < 7:48400/139‑1 (MQ=255) gACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTg > 8:48400/1‑139 (MQ=255) aCAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTGGCGCACGGCAt > 6:134411/1‑149 (MQ=255) aCAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTGGCGCACGGCAt > 7:336358/1‑149 (MQ=255) | AGTGCGCGCCGAATTGTGTGAAAAGGGCTACGACCTGCAACCGTGGTCGATGCCGAAGTAATATCGGCCAGCACAACAAGTGCGTGCATGGTCACGCACTTGTACAACTTCTCTGTTGCTGTTGTGGCAACTTTCCCAATTGCGACAAAGTGTCGCAACCTGCCAGTTCAATCCATCACCCTG‑AATTGTTGCAAGTGCTGGTAATCAGCCTGCAATTGTTCTGCCAGACGCTGCGCGCGTCCCAGGCGCACGGGCGCCAGTTCCATATCGACCAACAACGTGGCGCACGGCAT > NC_002947/3975019‑3975311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |