| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,136,218 | A→C | 8.7% | S143R (AGC→CGC) | PP_3640 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,136,218 | 0 | A | C | 8.7% | 210.6 / 9.1 | 69 | S143R (AGC→CGC) | PP_3640 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (29/34); new base C (2/4); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
CCAGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGC > NC_002947/4136073‑4136365 | ccAGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGgcagcg > 3:210677/1‑149 (MQ=255)ccAGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCA‑TTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGgcagcg > 1:68413/1‑148 (MQ=255) aGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGgcagcgca < 8:227649/149‑1 (MQ=255) aGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGgcagcgca < 3:136307/149‑1 (MQ=255) ggCCATGCAGGCGATGGATAGCCAGGCCGCCGACGGCGTTGGCATGGTCTGCGGCTTCTTCCATTTTCA‑GTGGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGGTACGCGATGAAGATCACAGCGgcagctcag > 7:353880/1‑149 (MQ=255) gCCATGCAGGCGCTGGATAGCCAGCCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGgcagcacagc > 2:272625/1‑149 (MQ=255) cATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCagcgcagcgc > 1:249042/1‑149 (MQ=255) cATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCagcgcagcgc > 6:83064/1‑149 (MQ=255) aGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGgcg < 3:26426/149‑1 (MQ=255) gcgcTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGTATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCt < 6:243649/149‑1 (MQ=255) gcTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGt > 3:183188/1‑149 (MQ=255) gcTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGt > 3:168385/1‑149 (MQ=255) gcTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGGCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCTgg < 7:97611/149‑2 (MQ=255) cTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGtt > 7:30636/1‑149 (MQ=255) gATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCgg > 8:224878/1‑149 (MQ=255) gCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCt < 8:38464/148‑1 (MQ=255) ccAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCAGGACGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCTGGCt > 1:275003/1‑148 (MQ=255) ccAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGa > 7:277868/1‑149 (MQ=255) cAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCTggga > 1:335696/1‑138 (MQ=255) cAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCTggga < 2:335696/141‑4 (MQ=255) aGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATc > 6:174969/1‑149 (MQ=255) ccgccgACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTg < 5:41918/149‑1 (MQ=255) cgtcgACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTgg < 5:289494/146‑1 (MQ=255) gtcgACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGga < 7:287802/147‑1 (MQ=255) gccgACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGga < 5:307119/149‑1 (MQ=255) ccgACGGCGTTGGCTTGGTCTGCGGGTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGTGGTTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTTTTCGGGCTGATCCTGgaa < 5:247714/149‑1 (MQ=255) ccgACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGAATGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGgaa < 1:374447/149‑1 (MQ=255) gACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGgaaga < 8:30636/149‑1 (MQ=255) gACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGgaag > 6:296494/1‑148 (MQ=255) ggCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATg < 4:210677/149‑1 (MQ=255) gCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGc > 4:211646/1‑147 (MQ=255) gCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCga < 8:103395/149‑1 (MQ=255) gTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGc < 5:296494/149‑1 (MQ=255) tCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGAGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCt > 2:300253/1‑149 (MQ=255) tGCCGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTCAAGATCCAAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTgg > 6:49305/1‑149 (MQ=255) cGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTgg < 5:83064/147‑1 (MQ=255) cGGCTTCTTCCA‑TTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTgg < 2:68413/146‑1 (MQ=255) cttcttCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCAt < 4:168385/149‑1 (MQ=255) ttcttcCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCAt > 8:222375/1‑148 (MQ=255) ctgccATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATca < 5:42780/145‑1 (MQ=255) ccATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGTCATCACAg < 3:131251/148‑1 (MQ=255) ttttCA‑GTCGGGCCTCTGTTCGCTGATTGTCGAGGGTCGCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGc < 4:107840/149‑1 (MQ=255) tCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGcc > 5:299637/1‑135 (MQ=255) tCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGcc < 6:299637/135‑1 (MQ=255) cA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCTg > 2:35705/1‑93 (MQ=38) cA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGCCCGCGCTGCGCTGCCGCTg < 1:35705/93‑1 (MQ=38) a‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACt < 4:183188/148‑1 (MQ=255) gggCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAAc < 5:174969/149‑1 (MQ=255) gggCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAAc < 6:106536/149‑1 (MQ=255) gCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACg > 3:268191/1‑148 (MQ=255) ccTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGc < 7:164381/149‑1 (MQ=255) ctctGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCt > 5:254700/1‑149 (MQ=255) gCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACt > 5:258874/1‑149 (MQ=255) gCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCACAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCAc < 1:272625/148‑1 (MQ=255) tGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACttg > 3:273523/1‑149 (MQ=255) gATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACttgt > 2:352421/1‑149 (MQ=255) tGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTtgttgt > 3:61265/1‑149 (MQ=255) gTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTtgttgt < 8:277868/148‑1 (MQ=255) tCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTc < 4:268191/149‑1 (MQ=255) gAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCt < 1:300253/149‑1 (MQ=255) gggTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGTGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTg > 2:177446/1‑148 (MQ=255) gACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTgcg > 7:147591/1‑149 (MQ=255) tGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTgcgc > 7:35614/1‑147 (MQ=255) tGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTgcgc > 8:292921/1‑147 (MQ=255) gATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCTGAGCGCGGGCGCTGTTCGGGCTGATCCTGGATTAATGGCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCca < 8:353880/147‑1 (MQ=255) tCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCcagcag > 6:342879/1‑149 (MQ=255) gTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGTGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCcagcag < 1:177446/145‑1 (MQ=255) cgcgCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACACACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGc < 7:224878/149‑1 (MQ=255) gcgcTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTAc > 4:348562/1‑93 (MQ=255) gcgcTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTAc < 3:348562/93‑1 (MQ=255) cgcTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAg < 4:273523/149‑1 (MQ=255) cTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAggg < 8:317017/149‑1 (MQ=255) tGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAggg > 5:9877/1‑148 (MQ=255) gATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATc > 4:183032/1‑149 (MQ=255) gATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATc > 4:173991/1‑149 (MQ=255) ccAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTg > 3:89941/1‑149 (MQ=255) cAGCGGCAGCGCAGCGCGGGCGCTGTTCGCGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTgg < 5:334482/149‑1 (MQ=255) cagcgcagcgCGGGCGCTGTTCGGGCTGATCCTGGCAGAATGCCGGCGAGATGCGGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTgggcggtc < 2:275003/149‑3 (MQ=255) cagcgcagcgCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTgggcgggc > 3:161815/1‑149 (MQ=255) | CCAGGCCATGCAGGCGCTGGATAGCCAGGCCGCCGACGGCGTTGGCTTGGTCTGCGGCTTCTTCCATTTTCA‑GTCGGGCCTCTGCTCGCTGATTGTCGAGGGTCTCGCTGACTGGATCTTGTTACGCGCTGAAGATCCCAGCGGCAGCGCAGCGCGGGCGCTGTTCGGGCTGATCCTGGAAGAATGCCGGCGAGATGCTGGGCCATCACAGATGCTACTGGAACGGCTGACGCACTTGTTGTTCCTGTACGTGCTGCGCCAGCAGGTGCACGCAGGGCAATCGCTGGGCGGGC > NC_002947/4136073‑4136365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |