| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,162,108 | G→A | 8.3% | intergenic (‑52/+25) | PP_3663 ← / ← pssA | GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,162,108 | 0 | G | A | 8.3% | 235.2 / 8.2 | 84 | intergenic (‑52/+25) | PP_3663/pssA | GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (39/38); new base A (3/4); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGATTCTCGG > NC_002947/4161965‑4162252 | aTGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGa > 7:279127/1‑148 (MQ=255) cGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCGACA‑gg < 8:37262/149‑1 (MQ=255) gATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑ggg > 3:214223/1‑149 (MQ=255) gATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑ggg > 4:207111/1‑149 (MQ=255) gATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑ggg > 7:71080/1‑149 (MQ=255) aTCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGTCCTGTCGCCGGCAAGCCAGCGACA‑gggc < 5:376925/149‑2 (MQ=255) aTCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGACCCTGTCGCCGGCAAGCCAGCGACA‑gggc > 3:238813/1‑148 (MQ=255) tCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGACCCTGTCGCCGGCAAGCCAGCGACA‑gggc < 4:238813/148‑2 (MQ=255) gTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAg > 1:269/1‑149 (MQ=255) gTGATCACGGTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCa < 8:265032/148‑1 (MQ=255) gATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTa < 3:249740/149‑1 (MQ=255) aCGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGc < 2:220880/132‑1 (MQ=255) aCGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGc > 1:220880/1‑132 (MQ=255) cGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGc < 4:240194/149‑1 (MQ=255) gTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCg < 4:214223/149‑1 (MQ=255) ttCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGa < 2:250631/149‑1 (MQ=255) cAGAGGGTCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGAt < 6:95102/148‑1 (MQ=255) gagGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGt > 1:123503/1‑148 (MQ=255) agGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCa < 2:364804/149‑1 (MQ=255) ggCCTTGCACTGTTGCCTTCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCagag < 1:271570/149‑1 (MQ=255) ggCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCagag < 3:179312/149‑1 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTAc < 4:317319/133‑1 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTAc > 3:317319/1‑133 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCg > 5:44080/1‑120 (MQ=255) ccTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCCGGCAAGCCAGCg < 6:44080/120‑1 (MQ=255) tGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGCGCAccc > 1:45800/1‑149 (MQ=255) tGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCAccc > 7:58480/1‑149 (MQ=255) gCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCg > 2:19992/1‑149 (MQ=255) aCTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCt < 3:207111/149‑1 (MQ=255) tGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCtt > 2:314192/1‑148 (MQ=255) cTGCACATTGTAATCCGGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAAc > 1:188298/1‑149 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAAc > 8:100234/1‑149 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAAc < 1:314192/149‑1 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAAc < 3:122331/149‑1 (MQ=255) cTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAAAATCATAATGACATCAATGCGCGCTGCGCACCACTCTGGCCCTGTAGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAAc > 4:81516/1‑149 (MQ=255) tGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACg > 7:189090/1‑149 (MQ=255) cacaTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACgg < 3:368284/148‑1 (MQ=255) cacaTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGc > 8:221256/1‑149 (MQ=255) caTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTTGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTc < 8:71080/149‑1 (MQ=255) aTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTc > 3:10924/1‑148 (MQ=255) aTTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTc > 1:336865/1‑148 (MQ=255) ttGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACgg < 6:344439/144‑1 (MQ=255) ttGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACgg > 5:344439/1‑144 (MQ=255) tAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAAcc > 7:46783/1‑149 (MQ=255) tAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAAc < 2:13727/148‑1 (MQ=255) aTCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCgg < 3:134084/149‑1 (MQ=255) aGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGACAGAGCACCCGCTTGATCAACGGCTCCAACCGGCta > 8:180169/1‑148 (MQ=255) cccTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAgc > 2:199874/1‑149 (MQ=255) tGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACGCGCTTGATCAACGGCTCCAACCGGCTATAGCGCa > 2:294242/1‑149 (MQ=255) tGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAgcgc > 7:313031/1‑148 (MQ=255) aCAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCa < 2:269/147‑1 (MQ=255) aCAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAc > 8:123406/1‑149 (MQ=255) aaaGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAAcc > 2:251580/1‑148 (MQ=255) gggCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACg < 2:188298/149‑1 (MQ=255) ccGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACg > 4:265927/1‑146 (MQ=255) cagcaATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTg < 7:221256/149‑1 (MQ=255) agcaATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTgc < 1:199874/149‑1 (MQ=255) agcaATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTgc < 8:46783/149‑1 (MQ=255) tAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACTGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgctt < 8:189090/149‑1 (MQ=255) tAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCaa > 1:301205/1‑122 (MQ=255) tAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCaa < 2:301205/122‑1 (MQ=255) aCATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCaa < 1:283857/117‑1 (MQ=255) aCATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCaa > 2:283857/1‑117 (MQ=255) aCATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGa < 1:19992/148‑1 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACTGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg < 2:51133/143‑1 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACTGGCTATAGCGCAACCGACGCAGAAACTTGCGCActtgcttg > 1:51133/1‑143 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGCCGCAGACACTTGCGCACTTGCTTGGGATGt > 8:203239/1‑149 (MQ=255) aTCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGt > 1:169301/1‑149 (MQ=255) tCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGtt < 7:123406/149‑1 (MQ=255) aaTGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCg < 1:144570/149‑1 (MQ=255) aaTGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCg > 2:188070/1‑149 (MQ=255) aTGCGCGGTGCGCACCACTCTGGCCCTGTCTCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACCTGCGCACTTGCTTGGGATGTTCgg < 8:279127/149‑1 (MQ=255) cgcgGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGcc < 7:100234/148‑1 (MQ=255) cgGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTtc < 7:275839/149‑1 (MQ=255) ggTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTtct < 7:180169/149‑1 (MQ=255) gTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTtctc < 8:58480/149‑1 (MQ=255) cgcACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTcccc > 5:10652/1‑149 (MQ=255) ctGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCctc > 8:117063/1‑149 (MQ=255) gCCCTGTCGCTGGCTTGCCGGCGACAGGGGTCAGTACAGGTGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTg > 1:206240/1‑149 (MQ=255) gCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTg < 4:10924/148‑1 (MQ=255) cTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCg > 6:114694/1‑148 (MQ=255) cTGTCGCCGGCAAGCCAGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTACTCCCCCAGCGCCTCTGCCg > 3:323215/1‑148 (MQ=255) gCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGa > 3:188874/1‑149 (MQ=255) gcaggCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGATTCTCgg < 8:313031/145‑1 (MQ=255) gCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGATTCTCg < 5:114694/147‑1 (MQ=255) | ATGCGATCGTGATCACGTTCAGAGGGGCCTTGCACTGTTGCCTGCACATTGTAATCCAGCCCCTGACAAAGGGCCGTGGGCAGCAATATCATAATGACATCAATGCGCGGTGCGCACCACTCTGGCCCTGTCGCTGGCTTGCCGGCGACA‑GGGTCAGTACAGGCGATGTCAGAGCACCCGCTTGATCAACGGCTCCAACCGGCTATAGCGCAACCGACGCAGAAACTTGCGCACTTGCTTGGGATGTTCGGCCTTCTCCCCCAGCGCCTCTGCCGAACCGATTCTCGG > NC_002947/4161965‑4162252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |