| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,170,384 | A→G | 5.4% | T36A (ACC→GCC) | PP_3669 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,170,384 | 0 | A | G | 5.4% | 224.5 / 2.1 | 75 | T36A (ACC→GCC) | PP_3669 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (37/33); new base G (2/2); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
CAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGC > NC_002947/4170238‑4170532 | cAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCa < 4:119687/147‑1 (MQ=255) aaTACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCAccc < 7:246382/149‑1 (MQ=255) aaTACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCAcc < 5:223585/148‑1 (MQ=255) acacAGCCATACCCTTTTCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAAt < 6:20704/149‑1 (MQ=255) cacaGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATc > 6:200401/1‑149 (MQ=255) caGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGATAAACAGCTTTTCACCCacgcgg < 2:266672/149‑6 (MQ=255) aTACCCTTTGCCCAGGACGCCGAGCCATCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGt > 6:153382/1‑148 (MQ=255) ccTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAgcg < 5:153986/149‑1 (MQ=255) cTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAgcgc > 3:231073/1‑149 (MQ=255) gCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGcgccgc < 2:70799/148‑1 (MQ=255) cccAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGccc < 5:153382/149‑1 (MQ=255) ccaacgACGCCGAGCCCTAATGAACAGCAACGACCTGCGCCGCGTCCACATGAAACTCCTGGTGCAGTTCGAAGCCCTGAAGATCGAACGAAACCTGACCCGCGTGCGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGcgccgac > 6:213636/6‑146 (MQ=255) ccAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCt > 2:87664/1‑149 (MQ=255) aCGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTcgc‑cc < 5:121954/149‑1 (MQ=255) gAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCt > 5:65964/1‑148 (MQ=255) gAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCt < 6:65964/148‑1 (MQ=255) cTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGa > 7:89884/1‑149 (MQ=255) tCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAg > 2:153939/1‑149 (MQ=255) aTGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGc < 8:344136/148‑1 (MQ=255) aTGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCt > 3:270295/1‑149 (MQ=255) ccGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTcg > 1:354457/1‑149 (MQ=255) cGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTcga < 6:7496/149‑1 (MQ=255) cAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTcgacg > 7:351537/1‑149 (MQ=255) cAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTcgac > 1:160223/1‑148 (MQ=255) ccTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCgc > 1:194595/1‑149 (MQ=255) tGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCGCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCgctg > 3:115710/1‑149 (MQ=255) tGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCgctg > 2:20596/1‑149 (MQ=255) tGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGGTTATCGCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCgctg > 3:121158/1‑149 (MQ=255) gcgTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATc < 1:153939/149‑1 (MQ=255) aCATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGc > 5:159802/1‑149 (MQ=255) cATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGAGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑ACGCCTGCGCGAGCTGATCGACGACCCGCTGCTGATCCGAAGCg > 5:89527/1‑149 (MQ=255) tGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGc < 8:351537/149‑1 (MQ=255) gAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTcgc‑cctcccactc > 7:193720/1‑107 (MQ=255) gAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTcgc‑cctcccactc < 8:193720/112‑6 (MQ=255) gAACCTGCTGGTGCTGTGCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCCCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCTCCTGCGCGAGCTGTTCGACGACCCGCAGCTGATCCGCAGCGGcc > 8:152954/1‑149 (MQ=255) aCCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGCACCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCg < 1:87664/149‑1 (MQ=255) ctgctgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCt > 8:174065/1‑104 (MQ=255) ctgctgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGc > 5:229299/1‑149 (MQ=255) ctgctgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCGGATCAGCAGCgggtcgtc < 4:270295/149‑7 (MQ=255) gctgGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCa > 1:196333/1‑149 (MQ=255) gTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATgg > 7:73518/1‑148 (MQ=255) gCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGtt < 4:236461/108‑1 (MQ=255) gCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGtt > 3:236461/1‑108 (MQ=255) ttCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAaccccc > 6:36742/1‑147 (MQ=255) ttCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAacc < 4:261953/146‑1 (MQ=255) ttCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAacc > 3:261953/1‑146 (MQ=255) aaGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAAcccacccca > 2:135061/1‑149 (MQ=255) aGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAAcccaccccac < 1:135061/149‑1 (MQ=255) cccTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACgg < 4:231073/149‑1 (MQ=255) ccTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGtt < 4:288367/96‑1 (MQ=255) ccTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGCCGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACggc > 2:342399/1‑148 (MQ=255) cTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGc > 4:33060/1‑149 (MQ=255) cTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCATCGC‑CCGCCTGCGCGAGCTGTTAGACGACCCGATGCTGATCCCCAGCGGCCGGGCCATGGAACCCACCCCCCGGGc > 4:281662/1‑149 (MQ=255) gatgatCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCa > 8:148620/1‑149 (MQ=255) gatgatCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCa > 7:246524/1‑149 (MQ=255) attatCGAACGCAACCTGACCCGCGTGGGTGAATAGCTGTTTATCAGCCAATCGAGCGTAAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATTGAACCCACCCCACGGGCCAt < 5:213636/146‑1 (MQ=255) atCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGc < 5:200401/148‑1 (MQ=255) tCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATg > 4:363283/1‑146 (MQ=255) tCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATg > 8:224150/1‑146 (MQ=255) cGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATg > 3:281455/1‑145 (MQ=255) aaCGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATc > 2:89928/1‑149 (MQ=255) aCGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACACACCCCACGGGCCATGCAGATCt < 2:194595/149‑1 (MQ=255) cGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCtt < 2:196333/149‑1 (MQ=255) gCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCttt > 8:65399/1‑149 (MQ=255) cAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTg < 6:229299/149‑1 (MQ=255) aCCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACt < 1:89928/149‑1 (MQ=255) cccGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTg < 2:354457/149‑1 (MQ=255) ccGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTgg > 5:136632/1‑149 (MQ=255) ccGCGTGGGGGAAAAGCTGGTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTgg < 2:240243/149‑1 (MQ=255) cgTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGACCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGcc < 4:298837/149‑1 (MQ=255) gTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGccc < 1:20596/149‑1 (MQ=255) tGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCa > 5:195214/1‑149 (MQ=255) gAAAAGCTGTTTATCGCCCAATCCACCGTCAGCGCCGCCCGCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCCGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCAt < 4:115710/149‑1 (MQ=255) aaaaGCTGGTTATCGCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCAt < 4:121158/148‑1 (MQ=255) aGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGAc < 3:363283/149‑1 (MQ=255) cTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGt < 7:224150/149‑1 (MQ=255) aCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCg < 7:65399/148‑1 (MQ=255) aCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGc < 7:148620/149‑1 (MQ=255) aCCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGc > 6:145076/1‑149 (MQ=255) | CAATACACAGCCATACCCTTTGCCCAGGACGCCGAGCCCTCATGAACCGCAACGACCTGCGCCGCGTCGACATGAACCTGCTGGTGCTGTTCGAAGCCCTGATGATCGAACGCAACCTGACCCGCGTGGGTGAAAAGCTGTTTATCACCCAATCCACCGTCAGCGCCGCCCTCGC‑CCGCCTGCGCGAGCTGTTCGACGACCCGCTGCTGATCCGCAGCGGCCGGGCCATGGAACCCACCCCACGGGCCATGCAGATCTTTGCTGAACTGGGCCCGGCCATGGACGTGATTTCCGC > NC_002947/4170238‑4170532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |