Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,175,529	T→C	6.8%	I70I (ATT→ATC)	PP_3676 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,175,529	0	T	C	6.8%	172.8 / 2.4	59	I70I (ATT→ATC)	PP_3676	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (27/28);  new base C (2/2);  total (29/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

TTAAAGGCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAATCGCCACCA  >  NC_002947/4175384‑4175677                                                                                                                                                   |                                                                                                                                                     ttAAAGGCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAAttttt                                                                                                                                                   >  4:371142/1‑149 (MQ=255) ttAAAGGCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAAttttt                                                                                                                                                   >  1:363284/1‑149 (MQ=255)    aaGGCTATCGCTACCGAAAGATGCGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATCTTTg                                                                                                                                                  >  7:208255/1‑147 (MQ=255)    aaGGCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTga                                                                                                                                                 <  8:8068/148‑1 (MQ=255)    aaGGCTATCGCTACCGAAAGATGAGCCTACATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATCTTTga                                                                                                                                                 >  7:202872/1‑148 (MQ=255)      ggCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTgaaga                                                                                                                                              <  1:171663/149‑1 (MQ=255)        cTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCATTGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAAt                                                                                                                                            >  2:326481/1‑149 (MQ=255)                   gAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCa                                                                                                                                  >  6:2605/1‑148 (MQ=255)                            gCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTaaaaa                                                                                                                         >  4:239674/1‑148 (MQ=255)                               tCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAAtctc                                                                                                                     >  4:247761/1‑149 (MQ=255)                                cgatctttGTGGCTAAACTTGGATAATCAATGCTATATCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATctcc                                                                                                                    <  1:152245/143‑1 (MQ=255)                                  aTTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCACGGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATctccc                                                                                                                   <  1:269989/149‑1 (MQ=255)                                       tgtgGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAAtctca                                                                                                                    >  2:152245/1‑141 (MQ=255)                                          ggCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAg                                                                                                             >  4:346285/1‑146 (MQ=255)                                           gCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACTCATTATTTTTATGCA‑GGCCGCCAAATCTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTaga                                                                                                         <  8:202872/149‑1 (MQ=255)                                           gCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTag                                                                                                          <  1:341735/148‑1 (MQ=255)                                           gCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTa                                                                                                           >  8:203695/1‑147 (MQ=255)                                           gCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATCTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTaga                                                                                                         <  8:208255/149‑1 (MQ=255)                                                  ttGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAgac                                                                                                      >  1:218189/1‑145 (MQ=255)                                                  ttGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAgac                                                                                                      <  2:218189/145‑1 (MQ=255)                                                    ggATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTgg                                                                                                >  4:248850/1‑149 (MQ=255)                                                     gATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTggg                                                                                               <  3:346285/149‑1 (MQ=255)                                                     gATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTgg                                                                                                <  3:239674/148‑1 (MQ=255)                                                          tCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAAc                                                                                          >  6:326633/1‑149 (MQ=255)                                                              tGCAATAGCACAAATAATATTATCGATATGCAACCACCAATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAATAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTta                                                                                      <  2:350193/149‑1 (MQ=255)                                                                 tataGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATAc                                                                                   >  8:284669/1‑149 (MQ=255)                                                                   taGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTtata                                                                                    <  3:247761/146‑1 (MQ=255)                                                                   taGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACtt                                                                                 >  3:125008/1‑149 (MQ=255)                                                                     gCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTg                                                                               >  7:132308/1‑149 (MQ=255)                                                                      cacaAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGc                                                                              >  4:33251/1‑149 (MQ=255)                                                                       acaAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGc                                                                              >  2:134333/1‑148 (MQ=255)                                                                         aaaTAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGc                                                                              >  4:135375/1‑146 (MQ=255)                                                                         aaaTAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGc                                                                              <  3:135375/146‑1 (MQ=255)                                                                         aaaTAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCAc                                                                           >  8:52913/1‑149 (MQ=255)                                                                          aataatATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCAc                                                                           >  1:244040/1‑148 (MQ=255)                                                                            taataTTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTAt                                                                        <  1:326481/149‑1 (MQ=255)                                                                                  tatCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGaaaa                                                                   >  3:316653/1‑148 (MQ=255)                                                                                      gATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACAtc                                                              <  5:2605/149‑1 (MQ=255)                                                                                       atatGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACAtct                                                             >  1:44440/1‑149 (MQ=255)                                                                                        tatGCAACCAACTATCCAAAGTAAGCCTAACTAATTATTTTTATGCA‑GGCCGACAAATTTTTGATTAATTTAAAAATCAAATTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACAtc                                                              <  1:296909/147‑1 (MQ=255)                                                                                          tGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCaa                                                          <  5:326633/149‑1 (MQ=255)                                                                                             aaccaacTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGCGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCt                                                       >  6:107585/1‑149 (MQ=255)                                                                                              accaacTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTAAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCtt                                                      <  8:132308/149‑1 (MQ=255)                                                                                                 aaatATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGAAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTaca                                                   <  3:211662/146‑1 (MQ=255)                                                                                                   cTATCCAAAGAAAGCCTAACGAATTAATTTTATGCA‑GGCCGCCATATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTAcaca                                                 <  7:297137/149‑1 (MQ=255)                                                                                                      tCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCAACTATGAAAAACATCTCAACCTTACACAtt                                               >  5:282602/1‑148 (MQ=255)                                                                                                               caccTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTaa                                     <  1:134333/147‑1 (MQ=255)                                                                                                                     aCGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCg                               <  3:371142/149‑1 (MQ=255)                                                                                                                       gCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCa                             <  3:33251/149‑1 (MQ=255)                                                                                                                          ttattTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACAtt                                               <  4:334128/128‑1 (MQ=255)                                                                                                                          ttattTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACAtt                                               >  3:334128/1‑128 (MQ=255)                                                                                                                             tttttATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAAc                        <  4:316653/148‑1 (MQ=255)                                                                                                                                    gCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGc                >  7:329624/1‑149 (MQ=255)                                                                                                                                     cA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGc                <  3:248850/148‑1 (MQ=255)                                                                                                                                     cA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGc                <  2:44440/148‑1 (MQ=255)                                                                                                                                      a‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCg               <  7:203695/148‑1 (MQ=255)                                                                                                                                         gccgccAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGtt             >  2:44231/1‑148 (MQ=255)                                                                                                                                           cgccAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAAt          >  4:15955/1‑149 (MQ=255)                                                                                                                                             ccAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAATCg        >  4:62179/1‑149 (MQ=255)                                                                                                                                                aaTTTTTTAAAAATTTAAAAATCAAATTAAAAATCTCCCTCCAATTACACACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAATCGcca     <  7:52913/149‑1 (MQ=255)                                                                                                                                                aaTTTTTGAAGAAATTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAATCGcca     <  2:363284/149‑1 (MQ=255)                                                                                                                                                   ttttGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGGATTAACAGATGGGCGTTAATCGccacca  >  5:365038/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TTAAAGGCTATCGCTACCGAAAGATGAGCCTCCATTCTTGTGGCGAAACTTGGATAATCAATGCTATAGCACAAATAATATTATCGATATGCAACCAACTATCCAAAGAAAGCCTAACGCATTATTTTTATGCA‑GGCCGCCAAATTTTTGAAGAATTTAAAAATCAAAGTAAAAATCTCCCTCCAAGTAGAGACGACTGGGGGAACTTTATACTTTGCCACTATGAAAAACATCTCAACCTTACACATTCAACGCTTAAAACTCGCATTAACAGATGGGCGTTAATCGCCACCA  >  NC_002947/4175384‑4175677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑