| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,269,627 | T→A | 6.2% | intergenic (‑327/‑234) | PP_3740 ← / → mrdA‑I | MFS transporter/transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,269,627 | 0 | T | A | 6.2% | 239.9 / 5.0 | 80 | intergenic (‑327/‑234) | PP_3740/mrdA‑I | MFS transporter/transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (34/41); new base A (3/2); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01 | |||||||||||
GATAATGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATGCCAGCCAG > NC_002947/4269481‑4269763 | gATAATGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTAc < 2:61838/149‑1 (MQ=255)gATAATGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTAc > 3:226655/1‑149 (MQ=255) aTAATGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTAcc > 8:281835/1‑149 (MQ=255) aTGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGa > 7:293807/1‑148 (MQ=255) gATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAg < 7:37765/149‑1 (MQ=255) cacaGACAACGTGACGAAACCACTGCCTAACTAACAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTAACCGAACatcagt < 8:27960/149‑6 (MQ=255) caGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGa < 8:293807/149‑1 (MQ=255) aGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGAt < 3:268193/149‑1 (MQ=255) acacCGTGACGAAACCACTGACTAACTATCAGGCGCGACCAATTTCACTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGAttt < 6:365490/149‑1 (MQ=255) aaCGTGACGAAACCACTGCCTAACTATCAGGCGCGAGCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTtgt < 8:46951/149‑1 (MQ=255) aaCGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTtgt < 4:89214/149‑1 (MQ=255) aaCGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTtgt > 3:299939/1‑149 (MQ=255) aaCGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTtgt < 7:240873/149‑1 (MQ=255) cGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTgg < 7:281835/149‑1 (MQ=255) aCGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATc > 1:222545/1‑148 (MQ=255) cGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATcc > 3:96264/1‑148 (MQ=255) gAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCca > 2:443/1‑148 (MQ=255) ccACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAAt < 3:363654/149‑1 (MQ=255) cACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAAtt < 8:24817/149‑1 (MQ=255) cACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAAt > 8:314534/1‑148 (MQ=255) cACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAAGAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGCACAGAAGCGATTTGTGGTTCGACACAtt > 8:15880/1‑149 (MQ=255) aCTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATta > 7:227930/1‑149 (MQ=255) aCTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATta > 5:367865/1‑149 (MQ=255) aCTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATta > 5:362567/1‑149 (MQ=255) cTGCCTAACTATCAGGCGCGACCAATTTGAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATta > 1:210114/1‑148 (MQ=255) ccTAACTATCTCGCTCGACCTATTTCAGTTCATTGCCACTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAAATCACAACCAAC‑‑GAAAACTGATCTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAAtcgatt < 8:256066/148‑6 (MQ=255) ccTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATaa > 4:371451/1‑148 (MQ=255) cTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATaaaa < 3:371451/149‑1 (MQ=255) aaCTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATaaaaaa > 7:74173/1‑149 (MQ=255) aCTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATaaaaaa > 3:130232/1‑148 (MQ=255) tCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAaccac < 4:96264/148‑1 (MQ=255) tCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAaccac < 1:443/148‑1 (MQ=255) cgACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAac > 4:351980/1‑138 (MQ=255) cgACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAac < 3:351980/138‑1 (MQ=255) gACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTc > 6:62357/1‑149 (MQ=255) gACCAATTTAACTTCATTGCCAGTAAAAATGATATTTTTTATTAATAAATTAAATATTTTAAAAATTCACAACCACCTTGAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGAc < 1:115735/149‑1 (MQ=255) ccAATTTCAGTTCATTGCCAGTAAAAATAATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGt < 7:264801/149‑1 (MQ=255) cAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGtc < 6:362567/149‑1 (MQ=255) cAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGtc < 6:367865/149‑1 (MQ=255) ttttCAGTTCATTGCCATTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGtcat < 7:281167/148‑1 (MQ=255) tttCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGtcat > 1:285267/1‑148 (MQ=255) tCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGtcatca < 5:62357/148‑1 (MQ=255) aGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGa < 7:163756/149‑1 (MQ=255) gTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTAACAACCAAC‑‑GAAAACTGATTTTAGTTTAAAGAACAGAATCTATTTGTGGATAAACAAATTATAAAAAACCACCCATGAATCGTCATCATGa > 5:133468/1‑148 (MQ=255) ttCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACt > 2:281597/1‑149 (MQ=255) ttGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGc < 4:993/149‑1 (MQ=255) ttGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACAACCACTGACTCGTCATCATGAATcag > 5:263082/1‑146 (MQ=255) tGCCAGTAAAAATCATATTTTTTATAAATAATTTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCAAGACTCCGc > 6:200651/1‑148 (MQ=255) cAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATg < 8:74173/149‑1 (MQ=255) cAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACGGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACAACCCCTGACTCGTCATCATGACTCCGCAAt > 3:24489/1‑148 (MQ=255) aGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGa < 4:130232/149‑1 (MQ=255) tAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGaa > 8:285729/1‑148 (MQ=255) aaaTCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑TAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACaaa < 5:240704/149‑1 (MQ=255) atatTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGTATACACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTc < 5:116067/149‑1 (MQ=255) atatTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCtt > 8:98152/1‑148 (MQ=255) atatTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTc < 4:226655/149‑1 (MQ=255) atTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACTAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCat > 8:352255/1‑149 (MQ=255) atTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCa > 6:272777/1‑148 (MQ=255) ttttttATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCata > 2:341803/1‑149 (MQ=255) ttttttATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCata > 8:83542/1‑149 (MQ=255) ataaatTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCa < 7:285729/149‑1 (MQ=255) ataaatTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCa < 4:299939/149‑1 (MQ=255) cAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGTTTACCGAACAGAATCTATTTGTTGATCCACAAATTATAAAAAACCACCCCTGACTCCTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGccc < 5:200651/148‑1 (MQ=255) aTAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGa < 7:314534/149‑1 (MQ=255) tttATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCAt < 1:79034/149‑1 (MQ=255) tataAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATg < 8:227930/148‑1 (MQ=255) ataACTTCACAACCAAC‑‑GAAAACTGATGTTCGGGTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATgg < 6:206408/148‑1 (MQ=255) ataAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATgg < 2:285267/148‑1 (MQ=255) acaACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGAGCCCTGATCATGGGGCACACAg > 7:109794/1‑149 (MQ=255) caaccaac‑‑GAAAAGTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGc < 2:210114/149‑1 (MQ=255) accaac‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCg < 2:222545/149‑1 (MQ=255) caac‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGAt > 7:325577/1‑149 (MQ=255) aac‑‑GAAAACTGATGTTCGGTTACCGAACATAATCGATTTGTGGATCCACAAATTATTAAAAACCTCCCCTGACTCGTCATCATGACTCCGCAATGTACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATg < 7:15880/149‑1 (MQ=255) aac‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATg > 3:317948/1‑149 (MQ=255) gAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATgcca < 2:339059/149‑1 (MQ=255) gAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATgc > 2:70781/1‑147 (MQ=255) attctGTTCGGTAACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGCCTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATGccagccag > 7:131795/5‑149 (MQ=255) attctGTTCGGTAACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATgcca < 7:80697/140‑1 (MQ=255) attctGTTCGGTAACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATgcca > 8:80697/5‑144 (MQ=255) attctGTTCGGTAACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATGccagccag > 5:31867/5‑149 (MQ=255) | GATAATGGATCCACAGACAACGTGACGAAACCACTGCCTAACTATCAGGCGCGACCAATTTCAGTTCATTGCCAGTAAAAATCATATTTTTTATAAATAAATTCAATAGTTTATAAATTCACAACCAAC‑‑GAAAACTGATGTTCGGTTACCGAACAGAATCGATTTGTGGATCCACAAATTATAAAAAACCACCCCTGACTCGTCATCATGACTCCGCAATGAACAAATCTTCATATTCCCCCTCAGCGCCCTGATCATGGGGCACACAGCCGATGCCAGCCAG > NC_002947/4269481‑4269763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |