| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,174 | A→C | 8.3% | intergenic (+59/+24) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,174 | 0 | A | C | 8.3% | 331.0 / 17.6 | 118 | intergenic (+59/+24) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (56/51); new base C (5/5); total (61/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.54e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
ATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGTG > NC_002947/36030‑36321 | aTGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTg > 1:128762/1‑149 (MQ=255) aCTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑t > 3:254839/1‑149 (MQ=255) aCTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑t > 3:136847/1‑149 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tt > 2:128722/1‑148 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttt > 2:55412/1‑149 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttt > 2:243739/1‑149 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tt < 1:128722/146‑1 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt > 8:96530/1‑149 (MQ=255) ctgaacAGAACAAAAAAAAAGTCGCTCAATAGCAAAAGAAAGAAAGCAAGGATGTTAAGGAACAAGCAGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt < 8:271486/143‑1 (MQ=255) cgtaCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGTTAAGGAACAAGCCGACAATTAATCTGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt < 3:258244/145‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTTAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGAATTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTtg > 1:102924/1‑149 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt < 4:246982/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt < 6:159221/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt < 7:147259/147‑1 (MQ=255) cGGACCAGAAAAAACAACAAGTCGCTCAAGATCAAAATAAAGAAAGCAAGGATGGTAAGGAACAAGCCGAAAATTAATCGGCTGTTAAATAGGACTTCAAATGACGAACGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑tttt < 3:12352/146‑1 (MQ=255) ggACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑TTTTTtgt < 7:277269/149‑1 (MQ=255) ggACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGC‑TTTTTtgt < 2:141922/149‑1 (MQ=255) gACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAATCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTtgtg < 6:84649/149‑1 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGc > 4:310656/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCtt < 3:357872/149‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑ttttt < 8:328649/140‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTg > 2:347453/1‑148 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTg > 5:168186/1‑148 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt < 6:84898/140‑1 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑tttttt > 5:84898/1‑140 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAAtt > 8:248614/1‑147 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTa < 5:367674/149‑1 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGcc < 5:160447/149‑1 (MQ=255) acaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGcc > 1:38157/1‑149 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTTCTTGGAATTTAGCCt > 7:251255/1‑148 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCtt > 1:221947/1‑149 (MQ=255) aaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCtt < 4:276389/149‑1 (MQ=255) gTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCg > 2:249159/1‑149 (MQ=255) cTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCt > 3:335851/1‑149 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGGGACATAGGACGTCAAAGGACGAAAGAAATCGACAAAAAAGCACTGGTAAACCCTCGC‑TTTTTTGTGCTTGGACTTTCGCCTACGTTCTTGc > 7:174824/1‑149 (MQ=255) agagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCg < 3:203681/149‑1 (MQ=255) agCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 5:220452/149‑1 (MQ=255) gCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 1:243739/149‑1 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGtt > 7:28796/1‑149 (MQ=255) gaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTc > 3:144421/1‑149 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACATGGC‑TTTTTTGTGCTTGGAATTTATCCTTCGTTCTTGCGAGGCGTTACCGCAtg > 1:341330/1‑148 (MQ=255) cgCAAGGATGGGAAGGAACAAGCCGACAATTAATCGGCGTTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTg < 6:232633/148‑1 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCa > 8:350666/1‑145 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCa < 7:350666/145‑1 (MQ=255) cAAGGATGGTAATTTACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCt < 1:315501/149‑1 (MQ=255) aGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCttt > 4:199220/1‑149 (MQ=255) tGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTcc < 2:221947/149‑1 (MQ=255) gTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATACGACTTCATATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGATTGGAAATTGGCCTTCTTTCTTGCGAGGAGTTTCCGCATTGCTTTCTCCgt > 5:320265/1‑148 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc < 5:72044/149‑1 (MQ=255) aGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCa < 7:120001/149‑1 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCg > 1:33991/1‑149 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCg > 4:370032/1‑149 (MQ=255) cGACAATTAATAGGCGGTTAAATAGGACTTCTATAGACGAAAGAAATCGACAAAAAAGCCTGGGTAACACCTGGC‑TTTTTAGAGGGAGGAAAAAAGCCTTCGTTGTTGAGACGCGTTTCAGCATTGCTTTGTCCTGCAAGACCATCgg > 2:40525/1‑148 (MQ=255) ttAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtg > 2:199497/1‑149 (MQ=255) aTCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGc < 7:96530/149‑1 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg < 8:169801/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 8:12533/149‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg < 1:224539/99‑1 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAg > 2:224539/1‑99 (MQ=255) gTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCgg > 8:163334/1‑148 (MQ=255) ttAAATTGGAGTTCAATTGACGATAGAAATCGACAATAAAGCCAGGGTAAAACCTTGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTGCGGCCAGACCCTCGGCACCTTGT‑‑GGG‑GCGTTTc < 5:32838/149‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGcc < 8:152001/118‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGcc > 7:152001/1‑118 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTc < 1:55412/148‑1 (MQ=255) aTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTcc > 7:351558/1‑148 (MQ=255) ggACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATg < 2:128762/149‑1 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATgg > 5:252390/1‑149 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATgg > 1:16375/1‑149 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCt > 8:173273/1‑125 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCt < 7:173273/125‑1 (MQ=255) aaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCACGGCACCTTGTGCGGG‑GCGTTTCCAATGGCAcagca < 1:249159/149‑1 (MQ=255) aTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCAcagcag > 3:172704/1‑149 (MQ=255) cGAAAGAAATCTTCAAAACAGCCAGGGTAAAACCTGTC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCATTTGCACAGCAGTAgc < 2:372057/149‑1 (MQ=255) aagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAgatgg > 7:262320/1‑149 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGctggctgg < 1:199497/149‑1 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGctggctgg > 2:131600/1‑149 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTcc < 7:1323/124‑1 (MQ=255) cGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGt > 6:148073/1‑149 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTGCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 3:47673/149‑1 (MQ=255) aCAAAAAAGCCAGGGTAACACCTGGC‑TTTTTTGTGCTTGGAAGTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 7:103810/1‑149 (MQ=255) aCAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 7:264394/149‑1 (MQ=255) cAAAAAAGCCAGGTTTTACCCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 8:86999/148‑1 (MQ=255) cAAAAAAGCCAGGTTTTACCCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 7:86999/1‑148 (MQ=255) cAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCTGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCg < 6:307382/149‑1 (MQ=255) aaaaaaGCCAGTGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtgt < 6:196100/105‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCTTTCTTGCGAGGCGTTTCCGGATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGTCGTTCGc < 4:369292/149‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtgt > 5:196100/1‑105 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 5:33544/1‑149 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGC‑GTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 2:285105/1‑149 (MQ=255) aaaaGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt < 3:310656/149‑1 (MQ=255) aaaaCCCAGGGTAAATCCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGTCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt < 6:320265/149‑1 (MQ=255) aaGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCg < 6:252390/149‑1 (MQ=255) ccAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTg < 4:172704/149‑1 (MQ=255) cAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGa > 4:292449/1‑149 (MQ=255) aGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGAt > 6:272628/1‑149 (MQ=255) gggTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc > 7:159260/1‑149 (MQ=255) ggctAAAAGATGGA‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGAGAGGCTTTTCCGCATTGCTTTCTCCGGCCAGACCGTCGGCACCTTGTGCGGG‑GCGTTTCCTATGCCACAGGAGGAGCTGGCTGGGGTTCGCTTCTGTGATc < 5:215020/146‑1 (MQ=255) tAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 3:97342/149‑1 (MQ=255) aaCCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGAGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgt < 1:285105/149‑1 (MQ=255) aaCCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgtg > 3:169875/1‑149 (MQ=255) | ATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGC‑TTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGG‑GCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGTG > NC_002947/36030‑36321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |