| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 355,218 | C→A | 5.7% | intergenic (‑47/+38) | cbcW ← / ← cbcX | choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 355,218 | 0 | C | A | 5.7% | 289.1 / 5.8 | 88 | intergenic (‑47/+38) | cbcW/cbcX | choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (38/45); new base A (2/3); total (40/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.42e-01 | |||||||||||
GCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTT > NC_002947/355077‑355366 | gcgATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGTGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑cc > 4:242326/1‑149 (MQ=255) aTGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGc < 1:105559/149‑1 (MQ=255) aTGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGc < 1:176167/149‑1 (MQ=255) gCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTG‑CCTGcccc < 6:6157/149‑1 (MQ=255) gCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTG‑CCTGcccc < 6:113869/149‑1 (MQ=255) gTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGcccc > 8:214911/1‑147 (MQ=255) tCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGACCGTG‑CCTGCCCCggg < 4:109105/149‑3 (MQ=255) gAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAgg > 2:366139/1‑148 (MQ=255) aaGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTa < 2:194554/149‑1 (MQ=255) aGTAATTAGCGCCGTTCTGGTGAATCCATTCGACGAACGACGAGATGTACTCGCCCAGGGGTATTTTCTGATCGATAAGCATGATATCGATCTTCCACCTGCATATATTTAAATCAACCCGGGGAAGGCACGGT‑CCTGCCCCGAGGTa < 8:146965/148‑1 (MQ=255) cgcgCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTAc < 6:358584/148‑1 (MQ=255) gcgcCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACt < 1:98919/148‑1 (MQ=255) gcgcCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTg > 5:151408/1‑149 (MQ=255) gcCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCg < 8:242145/149‑1 (MQ=255) cGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTa < 6:151408/149‑1 (MQ=255) cGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTa < 1:366139/149‑1 (MQ=255) ttCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGt > 2:248436/1‑149 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGTCCCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTa < 1:55553/149‑1 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGtt < 8:318805/147‑1 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGtt > 7:318805/1‑147 (MQ=255) tCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTAt > 5:87236/1‑149 (MQ=255) cAGCCATTCGACGAACGACGCGATGTACTGTCCCAGGGGTTTTTTCTGATCTCTAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTAtt < 5:331718/149‑1 (MQ=255) aGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTAtt < 1:241592/148‑1 (MQ=255) gCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGc > 6:85983/1‑149 (MQ=255) ccATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCg > 8:60093/1‑149 (MQ=255) ccATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCg < 7:167154/149‑1 (MQ=255) aTTCGATGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTa < 7:96344/149‑1 (MQ=255) aTTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGt > 3:193642/1‑148 (MQ=255) aTTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGt > 7:62582/1‑148 (MQ=255) gacgaACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCt > 7:297482/1‑149 (MQ=255) gaacgaCGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTgg > 6:262957/1‑149 (MQ=255) gaacgaCGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTgg < 1:131598/149‑1 (MQ=255) aacgaCGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGc > 4:342100/1‑149 (MQ=255) cgacgCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCt < 6:185207/149‑1 (MQ=255) acgCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCtt > 2:298278/1‑148 (MQ=255) acgCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTg < 7:214911/149‑1 (MQ=255) gcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc < 6:96207/149‑1 (MQ=255) gcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc < 1:248436/149‑1 (MQ=255) gcgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGAc > 3:338794/1‑149 (MQ=255) cgATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGCAAGCTTGGCCTTGAcc < 4:110064/149‑1 (MQ=255) gATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCg > 4:25780/1‑149 (MQ=255) tGTACAGGCCCAGGGGCATATTCTGATCGATAAGCACGATCGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCg < 4:199464/147‑1 (MQ=255) cTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTcca < 3:25780/149‑1 (MQ=255) tGGCCCAGGGGTATATTCTGATCGAAAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag < 4:218802/149‑1 (MQ=255) gCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag < 8:297482/147‑1 (MQ=255) gCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag < 3:342100/147‑1 (MQ=255) ccAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccaggc > 4:186666/1‑147 (MQ=255) gTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAg < 3:183734/118‑1 (MQ=255) gTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAg > 4:183734/1‑118 (MQ=255) gTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTg > 3:235518/1‑149 (MQ=255) gTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTg > 2:239233/1‑149 (MQ=255) gTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTg > 7:256669/1‑149 (MQ=255) tGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTGGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAAc > 5:239516/1‑149 (MQ=255) tGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAAc > 1:368474/1‑149 (MQ=255) gATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACg < 7:235938/149‑1 (MQ=255) aTCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACgg < 1:239233/149‑1 (MQ=255) aTAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtggt < 4:338794/149‑1 (MQ=255) aTAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtgg > 1:221435/1‑148 (MQ=255) aTAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggt > 7:254185/1‑146 (MQ=255) aTAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggt < 8:254185/146‑1 (MQ=255) tAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACggtggt > 6:25567/1‑148 (MQ=255) aGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAAc > 6:329613/1‑149 (MQ=255) gATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCgg > 7:283494/1‑149 (MQ=255) tAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGgcc < 4:193642/149‑1 (MQ=255) gAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGcc < 4:357447/123‑1 (MQ=255) gAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGcc > 3:357447/1‑123 (MQ=255) gAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGgccagc > 1:8210/1‑148 (MQ=255) gAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGgccagc > 1:149783/1‑148 (MQ=255) aGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGgccagcca < 7:60093/149‑1 (MQ=255) gCTTCCACTTCAATTCATTGAATTCACCCCGGGGCTGGCAGGGT‑CCTGCCCGTTGTTTGCGAAACTGGGTTGTTCGTAATTGCTTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGccagccag < 1:298278/149‑1 (MQ=255) gCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGccagccag < 2:221435/149‑1 (MQ=255) cACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATc < 8:62582/149‑1 (MQ=255) cACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATc < 5:262957/149‑1 (MQ=255) aCCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATcc > 2:122174/1‑149 (MQ=255) aCCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATcc > 8:14417/1‑149 (MQ=255) ccTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATc > 5:197708/1‑147 (MQ=255) ccTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATc > 4:268978/1‑147 (MQ=255) cTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAg > 6:160596/1‑149 (MQ=255) aaaTCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag > 3:82047/1‑89 (MQ=255) aaaTCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTccag < 4:82047/89‑1 (MQ=255) aaaccGGGGCAGTCACTGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTTACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTcc < 3:242326/145‑1 (MQ=255) aaCCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCt < 5:181464/149‑1 (MQ=255) ctcGGGGCAGGACCGTG‑CCTGCCCCGGGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCtt > 6:11204/3‑148 (MQ=255) ccGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGa < 4:235518/149‑1 (MQ=255) ccGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTCGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGa < 6:87236/149‑1 (MQ=255) ggggCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATc < 3:186666/149‑1 (MQ=255) ggggCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATc < 1:122174/149‑1 (MQ=255) gggCAGGACCGTG‑CCTGCCCCGAGGTAGAGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATc > 8:22388/1‑148 (MQ=255) caggcaCGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCAtt < 5:85983/149‑1 (MQ=255) gcaCGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCt > 5:28043/1‑149 (MQ=255) caCGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCtt < 7:14417/149‑1 (MQ=255) | GCGATGGCGTCGAAGTAATTCGCGCCGTTCTGGGTCAGCCATTCGACGAACGACGCGATGTACTGGCCCAGGGGTATTTTCTGATCGATAAGCATGATAGCGAGCTTCCACCTGCATAGATTGAAATCAACCCGGGGCAGGCACGGT‑CCTGCCCCGAGGTAGCGCTACTGCGTAGTTCGTTATTGCGTAAGCTTGGCCTTGACCGCCTCCAGGCCAGGCTTGCCATCAACGGTGGTAACGCCGGCCAGCCAGGCATCCAGCTTGCCTGGGTTGTCCTTGATCCATTTCTT > NC_002947/355077‑355366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |