| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 58,435 | G→C | 7.5% | intergenic (‑346/+342) | PP_5424 ← / ← PP_0050 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 58,435 | 0 | G | C | 7.5% | 204.9 / 6.0 | 67 | intergenic (‑346/+342) | PP_5424/PP_0050 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (32/30); new base C (2/3); total (34/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.47e-01 | |||||||||||
CCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAG > NC_002947/58290‑58579 | ccTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTg > 5:54388/1‑149 (MQ=255)actacGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGACGCTTTGGATAGCCTTGAAATTGAGGGCTGCAACTGCGCATTAGTCG‑‑GGCATGGGTACCAGAATGAGCCCCACCAATTTTGGCAGCAGAGGAAGATg > 8:321982/5‑149 (MQ=255) cTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGGATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTgg > 4:134554/1‑149 (MQ=255) cTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTgg < 2:43676/149‑1 (MQ=255) cTCCGTGAGGCCGGCCATCGGCATGCATCAGATCTTGATTGACAGGCGTGCCGCTTTGGCTAGCCGTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTgg < 4:120040/149‑1 (MQ=255) tCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCGCCGCAAGTTTGGCAGCAGAGGCAGCTGGt > 8:170174/1‑149 (MQ=255) ggccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCctct > 5:161601/1‑148 (MQ=255) gcaggccATAGTCATGCATCAGATTTTGATTGACACGCGTGCCTCTTTGGATAGCCTTGCAATTGCGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGa < 7:170174/146‑1 (MQ=255) ccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGaa < 4:221355/149‑1 (MQ=255) cggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgctg < 5:330921/149‑4 (MQ=255) gccATCGTCATTCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGCTGGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAag < 1:111681/149‑1 (MQ=255) gccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAagta < 6:221731/149‑1 (MQ=255) aTCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGc < 6:1776/130‑1 (MQ=255) aTCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGc > 5:1776/1‑130 (MQ=255) gTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGAcg > 3:49975/1‑149 (MQ=255) aTCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCa > 3:139809/1‑149 (MQ=255) aTCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCa > 5:373817/1‑149 (MQ=255) tCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCAt > 2:60702/1‑149 (MQ=255) cAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgctg > 6:104155/1‑129 (MQ=255) cAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgctg < 5:104155/132‑4 (MQ=255) aGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTg > 3:361197/1‑149 (MQ=255) tCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGc > 6:208144/1‑147 (MQ=255) gattgaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTc < 5:352055/148‑1 (MQ=255) gattgaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgct < 7:98218/123‑3 (MQ=255) gattgaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgct > 8:98218/1‑121 (MQ=255) attgaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCg < 3:58997/148‑1 (MQ=255) gaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGAt < 6:373817/148‑1 (MQ=255) acGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGa > 2:360847/1‑123 (MQ=255) gcgTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATTAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGaa < 7:321982/149‑1 (MQ=255) gcgTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGt < 5:285964/105‑1 (MQ=255) gcgTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGt > 6:285964/1‑105 (MQ=255) gCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAAccc > 6:367780/1‑148 (MQ=255) cGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAg < 7:292542/149‑1 (MQ=255) cGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGGTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAg < 6:164346/149‑1 (MQ=255) cTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGt > 1:105226/1‑149 (MQ=255) tGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTc < 4:49975/147‑1 (MQ=255) tGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTc < 1:183331/147‑1 (MQ=255) gATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCa < 3:58013/149‑1 (MQ=255) gCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGAc < 8:126453/148‑1 (MQ=255) ccTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCt > 8:118853/1‑84 (MQ=255) ccTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCt < 7:118853/84‑1 (MQ=255) ttGCAATTGATGCCTTCAACTGCGCATTTGTCG‑‑GGCCTGGGGACCAGCATGAGCCCCCGCAATTATGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGTTCGCCAGACTAgg < 2:156318/149‑1 (MQ=255) aaTTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGc > 5:113260/1‑148 (MQ=255) aaTTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTAAAGTAGTGACGGCGGGCGTTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGc > 3:264341/1‑148 (MQ=255) aTTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCt > 7:105800/1‑148 (MQ=255) gAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGTGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTaaa < 6:115118/148‑1 (MQ=255) gAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCTGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTaaa < 1:290733/148‑1 (MQ=255) gAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTaaa < 6:54388/148‑1 (MQ=255) gggCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGa < 4:361197/149‑1 (MQ=255) tGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGc > 3:299299/1‑149 (MQ=255) aaCTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGACCCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGc < 6:266959/149‑1 (MQ=255) tGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGac > 1:338588/1‑149 (MQ=255) cgcATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGact > 4:83837/1‑148 (MQ=255) aTTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTActc < 5:367780/149‑1 (MQ=255) tttGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTActcc < 4:139809/149‑1 (MQ=255) tttGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTActcc < 2:105226/149‑1 (MQ=255) gTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAag > 8:294127/1‑66 (MQ=255) g‑‑ggCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATcc < 3:83837/149‑1 (MQ=255) ggCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATccc > 3:242043/1‑149 (MQ=255) gCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGAAGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCt > 6:85274/1‑149 (MQ=255) tACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGa > 5:262612/1‑148 (MQ=255) cAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAg > 5:62865/1‑149 (MQ=255) tGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCAcg < 6:161601/149‑1 (MQ=255) cccGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGCCTACTCCTCATCCCTTACCGAAAAGTCACGCgtcgg > 6:32123/1‑149 (MQ=255) ccagCAATTTTGGCAGAAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCACTTACCGAAAAGTCACGCttctg > 2:197582/4‑147 (MQ=255) gcagcaGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGcc > 2:163947/1‑149 (MQ=255) ggAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAATCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAg > 6:62656/1‑149 (MQ=255) | CCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCG‑‑GGCCTGGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGCGGGCATTGCCAGTCGGATTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAG > NC_002947/58290‑58579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |