| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,833,371 | C→G | 5.5% | P228P (CCG→CCC) | PP_4246 ← | substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,833,371 | 0 | C | G | 5.5% | 233.7 / 2.3 | 72 | P228P (CCG→CCC) | PP_4246 | substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (34/34); new base G (2/2); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.58e-01 | |||||||||||
ACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATC > NC_002947/4833223‑4833518 | acTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGccccc > 8:273666/1‑149 (MQ=255)acTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGccccc > 7:196509/1‑149 (MQ=255) gggAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGgcgc < 1:70078/149‑1 (MQ=255) gAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCgcag < 5:65454/149‑1 (MQ=255) cGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCaa < 6:4454/149‑1 (MQ=255) cGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑g > 5:21112/1‑147 (MQ=255) aaCACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAgtg < 7:29739/149‑1 (MQ=255) acGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAgtggt > 8:16273/1‑148 (MQ=255) aTTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGAc < 4:74028/149‑1 (MQ=255) tttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGc < 1:165678/133‑1 (MQ=255) tttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGc > 2:165678/1‑133 (MQ=255) gTCTTGCGGTGCAGCCACTTTGATGCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGt < 5:272047/149‑1 (MQ=255) ttGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCaa > 4:204955/1‑149 (MQ=255) ccACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGaa < 1:355004/149‑1 (MQ=255) aCTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAgg < 5:89315/149‑1 (MQ=255) tttGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCa > 5:203556/1‑149 (MQ=255) aTTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTCCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAg < 2:263025/149‑1 (MQ=255) ttCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGc > 3:311493/1‑149 (MQ=255) ggTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTgc < 8:196509/149‑1 (MQ=255) gTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTACACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTgc > 1:54718/1‑149 (MQ=255) ggCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCt > 7:328282/1‑149 (MQ=255) gCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCa < 1:358493/138‑1 (MQ=255) gCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCa > 2:358493/1‑138 (MQ=255) cTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGc > 7:156665/1‑149 (MQ=255) tCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGgcg < 6:315155/86‑1 (MQ=255) tCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCt > 5:130866/1‑149 (MQ=255) gAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCg > 1:352165/1‑149 (MQ=255) aGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGcc > 6:43192/1‑149 (MQ=255) aTGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCgg < 6:21112/149‑1 (MQ=255) ttCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCa < 2:177065/149‑1 (MQ=255) ttCACCGCGGT‑CACGCAGGCCACGCAGCAGGGCAGCGATCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTCTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCa < 7:273666/149‑1 (MQ=255) aCCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAgg > 7:50366/1‑148 (MQ=255) aCGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCt > 3:254949/1‑147 (MQ=255) aCGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGa < 7:136156/149‑1 (MQ=255) aCGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGa < 4:311493/149‑1 (MQ=255) cGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAg < 2:54718/149‑1 (MQ=255) gCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGGTGAgg > 8:78658/1‑149 (MQ=255) ggCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAg < 5:43192/149‑1 (MQ=255) gCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAgg < 5:86813/149‑1 (MQ=255) gcagcaGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAAcgc > 4:221173/1‑149 (MQ=255) gcagcaGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAAcgc < 3:313505/149‑1 (MQ=255) gcagcaGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGACGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAAcgc > 5:343224/1‑149 (MQ=255) agcagGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGt < 3:204955/149‑1 (MQ=255) agcagGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGt < 8:156665/149‑1 (MQ=255) agcagGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGt < 2:352165/149‑1 (MQ=255) ggCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTGGGAACGCGTGAc > 6:84904/1‑147 (MQ=255) cAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAgg < 2:208150/149‑1 (MQ=255) aGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAggg < 3:266209/149‑1 (MQ=255) aGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAggg < 8:102974/149‑1 (MQ=255) cgaccgacTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGGGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGc > 4:108202/1‑148 (MQ=255) cGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGc > 1:215067/1‑148 (MQ=255) cGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGc > 1:220594/1‑148 (MQ=255) cGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGc > 4:346057/1‑148 (MQ=255) gAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCaa > 1:323686/1‑149 (MQ=255) aCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAata > 8:264339/1‑149 (MQ=255) aCTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCg < 2:323686/149‑1 (MQ=255) cTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGgcgc > 3:8145/1‑149 (MQ=255) cTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGgc < 8:50366/147‑1 (MQ=255) tCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGgcgc > 1:44481/1‑149 (MQ=255) tCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGcgcg > 3:210835/1‑149 (MQ=255) tCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGcgcg > 7:65385/1‑149 (MQ=255) tCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGcgcg > 5:276509/1‑149 (MQ=255) cGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATAACGGCGcggccg > 3:254019/1‑149 (MQ=255) tgctgcgcCCGGGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccggc > 1:118913/5‑149 (MQ=255) tgctgcgcCCGGGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccggc > 1:114329/5‑149 (MQ=255) tAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCa < 1:65149/126‑1 (MQ=255) tAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCa > 2:65149/1‑126 (MQ=255) aGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCATGCTCGCCGGGTTGCGTGCCAGGAAATCGGGGAGGTAGGACCGCGTGACCAGGGCAATATCGGCGCGGCCGGCCt > 3:147025/1‑149 (MQ=255) gcgcCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccg < 3:182463/143‑1 (MQ=255) gcgcCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccg > 4:182463/1‑143 (MQ=255) cgcCCGGGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTg < 2:114329/147‑1 (MQ=255) cgcCCGGGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTg < 2:118913/147‑1 (MQ=255) cgcCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCa < 7:16273/149‑1 (MQ=255) gcCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCAc < 4:210835/149‑1 (MQ=255) cccGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGACCGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCAt > 8:297040/1‑149 (MQ=255) cccGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCAt > 6:88049/1‑149 (MQ=255) ccGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCAt > 8:314347/1‑148 (MQ=255) ccGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATc < 6:130866/149‑1 (MQ=255) ccGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCAGCCTGCACCATc < 8:328282/149‑1 (MQ=255) | ACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGT‑CACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGC‑GTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATC > NC_002947/4833223‑4833518 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |