| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,837,281 | A→G | 8.1% | S430G (AGC→GGC) | ccoN‑I → | cbb3‑type cytochrome c oxidase subunit 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,837,281 | 0 | A | G | 8.1% | 211.1 / 6.5 | 74 | S430G (AGC→GGC) | ccoN‑I | cbb3‑type cytochrome c oxidase subunit 1 |
| Reads supporting (aligned to +/- strand): ref base A (36/32); new base G (4/2); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
ATCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTGAGGAGAAACGCC > NC_002947/4837134‑4837429 | aTCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGgccag > 7:72834/1‑149 (MQ=255) gcACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGGCGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAg > 7:109945/1‑149 (MQ=255) ctggctggCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtc < 5:312098/148‑1 (MQ=255) gctggcCACCATCGGTACCGTGCTGTACATCGCCTCTATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtcgtc < 5:141215/148‑1 (MQ=255) gctggcCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtcgtcg < 1:225464/149‑1 (MQ=255) gctggcCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtcgtc < 7:206393/148‑1 (MQ=255) caccaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCt > 5:197158/1‑149 (MQ=255) accaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCtt > 8:281836/1‑149 (MQ=255) ccaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTtc < 8:142734/149‑1 (MQ=255) ccaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTtc < 2:120379/149‑1 (MQ=255) ccaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTGGGTGGCTGGCCACCAAGGTTtccacgaac > 1:325257/1‑137 (MQ=18) ccaTCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTGGGTGGCTGGCCACCAAGGTTtccacgaac < 2:325257/144‑8 (MQ=18) gTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCACAGGGCATGATGTGGCGCGCGGTCAACAGCGCCGGCA‑‑CGATCACATACTCGTTCTTGGAAACATTGGTGGCCAGCCACCCCGGCTACGTCGTGCGGTTCGTggg > 1:77898/1‑149 (MQ=18) gTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCt > 2:366978/1‑149 (MQ=255) cATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGACTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTc < 3:171865/148‑1 (MQ=255) cATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTCGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTcc > 6:299634/1‑149 (MQ=255) aTCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCt > 3:302462/1‑149 (MQ=255) gCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCa < 3:347496/148‑1 (MQ=255) ccTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTGCTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGc > 1:364129/1‑149 (MQ=255) cTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCg > 5:164338/1‑149 (MQ=255) tCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCAAGGGATCACATACACGTTCTTGGAAACATTGGTGCCCAGCCACCCAGGATACGACGTCCGATTCGTCGGCGGCGCGAAATTCCTCAGc > 1:106626/1‑149 (MQ=21) tCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCgg > 6:198340/1‑149 (MQ=255) gATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGc < 1:366978/148‑1 (MQ=255) aTGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCAt > 7:348477/1‑149 (MQ=255) tgGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGt < 6:50174/148‑1 (MQ=255) tCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCTTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCAATCTTCCTAAGCGGCATGTTCCt > 4:254554/1‑148 (MQ=255) tCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtcgt < 1:29873/103‑1 (MQ=255) tCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTtcgt > 2:29873/1‑103 (MQ=255) aaCGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGGCGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGAt < 8:109945/149‑1 (MQ=255) aCGGGATCTCG‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAAGCTTTGTGGCCAGCCAGCCAGGCTTCGTCGTTCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGAt < 3:151008/148‑1 (MQ=255) cATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTTCTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCt < 2:364129/149‑1 (MQ=255) cATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCt > 6:41085/1‑149 (MQ=255) aTCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTg < 2:106626/149‑1 (MQ=255) gCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTACTGATGGCCTGGac > 2:55687/1‑148 (MQ=255) c‑cAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAaca > 3:177181/1‑149 (MQ=255) gggCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGaa < 5:235803/144‑1 (MQ=255) gggCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGaa > 6:235803/1‑144 (MQ=255) ggCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAacac < 8:255086/146‑1 (MQ=255) ggCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAacac > 7:255086/1‑146 (MQ=255) gcgcgcGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGc < 7:136921/149‑1 (MQ=255) gcgcgcGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGc < 1:361613/149‑1 (MQ=255) gcgcgcGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGc < 7:281836/149‑1 (MQ=255) gcgcgcGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGc < 6:164338/149‑1 (MQ=255) cgcgGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGtt < 4:302462/149‑1 (MQ=255) cgcgGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGtt < 5:299634/149‑1 (MQ=255) aaCAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAgc > 2:129089/1‑149 (MQ=255) cAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAgcgc > 7:33872/1‑149 (MQ=255) cGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGgc < 4:56321/125‑1 (MQ=255) cGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGgc > 3:56321/1‑125 (MQ=255) aCCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGc > 4:20968/1‑149 (MQ=255) cTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACg > 7:323973/1‑149 (MQ=255) gttcgtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGcc > 5:348315/1‑148 (MQ=255) gttcgtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGcc > 1:47795/1‑148 (MQ=255) gttcgtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGcc > 8:118487/1‑148 (MQ=255) gttcgtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGc < 2:77898/147‑1 (MQ=255) tgcgtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGACGTGCGCTTCGTCGCCGGCGCGATCTTCCTCAGCCGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCa < 8:72834/147‑1 (MQ=255) gtGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGtt < 8:348477/149‑1 (MQ=255) gacgAAGCCTGGGTGGCTGGCCACCAAGGTTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGtt > 4:297083/4‑149 (MQ=255) ggAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTgg > 7:43224/1‑149 (MQ=255) ggAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTgg > 1:171060/1‑149 (MQ=255) ggAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTgg > 5:361977/1‑149 (MQ=255) gAAGCCTGGGTGGCTGGCCACCAAGGTTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGc > 6:235388/1‑149 (MQ=255) gAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGc < 4:177181/149‑1 (MQ=255) aaCCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCTGTTGGCtt < 2:199897/149‑1 (MQ=255) aaCCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCtt < 7:118487/149‑1 (MQ=255) aaCCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCtt > 1:199897/1‑149 (MQ=255) aCCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCtt > 1:358623/1‑148 (MQ=255) ctgggtggCTGGCCACCAAGGTTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTgag < 3:297083/146‑1 (MQ=255) cTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTgag > 8:95614/1‑149 (MQ=255) cTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTCGCGCACCCTGACTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTagag > 4:246916/1‑149 (MQ=255) tgggtggCTGGCCACCAAGGTTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGACCACCTGGCGCCCCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTgag > 8:140261/3‑148 (MQ=255) ggtggCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCAATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTgagg < 3:254554/147‑1 (MQ=255) gtggCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTgaggag > 4:357669/1‑148 (MQ=255) tggCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCt > 3:61898/1‑140 (MQ=255) tggCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCt < 4:61898/140‑1 (MQ=255) gccagccaCCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGtt < 5:152810/134‑1 (MQ=255) gccagccaCCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGtt > 6:152810/1‑134 (MQ=255) gccagccaCCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTGAGGAGAAAc > 8:205308/1‑149 (MQ=255) cagccaCCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTGAGGAGAAACGc < 3:357669/149‑1 (MQ=255) agccaCCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGAAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTGAGGAGAAACGcc > 4:367650/1‑149 (MQ=255) | ATCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCC‑CAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCA‑‑CGCTCACCTACTCGTTCGTGGAAACCTTGGTGGCCAGCCACCCAGGCTTCGTCGTGCGCTTCGTCGGCGGCGCGATCTTCCTCAGCGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACCGTGCGTTCGCCAGCGCTTGACGTCGCCCCTGCGAACGCCCAGTTGGCTTGAGGAGAAACGCC > NC_002947/4837134‑4837429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |