| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,896,399 | T→C | 12.2% | intergenic (+32/‑176) | PP_4304 → / → sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,896,399 | 0 | T | C | 12.2% | 143.7 / 9.7 | 58 | intergenic (+32/‑176) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (32/18); new base C (3/4); total (35/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.10e-01 | |||||||||||
AATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCC > NC_002947/4896251‑4896546 | aaTGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAt < 3:168594/149‑1 (MQ=255) gCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATCGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCg > 5:191998/1‑149 (MQ=255) ccATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGc < 4:129974/149‑1 (MQ=255) cATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAC‑CCGCt > 2:277120/1‑149 (MQ=255) caTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTTAAT‑CCGGTGCTACAGGCGCGG‑ACCGTgcgc > 6:210749/1‑149 (MQ=255) ttgttcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACAGGCGCGG‑ACCGTGcgcg < 5:385391‑M1/50‑1 (MQ=255) aTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGcgcg < 3:136236/149‑1 (MQ=255) tGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCACATAGCGGGTAAAT‑CAGCTACTCAAGGCGCGG‑GCCCTGCGCgg > 6:229441/1‑149 (MQ=255) aTTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTATTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTc > 1:224843/1‑149 (MQ=255) tcttgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTcc < 4:290098‑M1/54‑1 (MQ=255) aagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGt > 6:385391‑M1/91‑149 (MQ=255) gCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAg > 6:300240/1‑145 (MQ=255) gCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAg < 5:300240/145‑1 (MQ=255) gCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGGAGGAGc > 2:269043/1‑149 (MQ=255) cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg < 6:250285/149‑1 (MQ=255) ggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg > 3:290098‑M1/82‑148 (MQ=255) ggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg > 5:373065‑M1/82‑148 (MQ=255) acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg < 7:113116/149‑1 (MQ=255) gggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGt > 3:200255‑M1/81‑149 (MQ=255) aagaagACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCGATTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGGGCGCGGGCC‑‑‑CCCGTTGGGGCcgggt > 7:336250/1‑147 (MQ=255) gaagtCCCACGAGCAGGGGGCGGCTTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCGCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTTCAg < 6:283708/111‑1 (MQ=39) gaagaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAAAGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAg > 5:283708/1‑111 (MQ=255) gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACGGG‑‑‑GG‑ACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTAccc < 1:352021/149‑1 (MQ=17) ccACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCcgc > 3:262878/1‑148 (MQ=255) aCGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTTAAT‑ACGCGCCTACAGGCGCGG‑ACCGGGCGCGGTGC‑‑‑CCCGGAGGAGCGGGGTTAACCGCGa > 1:204250/1‑148 (MQ=255) gtgCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGATTGGGTTGTTTCCCATAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAaga < 6:191998/147‑1 (MQ=255) cAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAC‑CCGCTCCTACGGG‑‑‑GG‑ACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGc < 1:277120/149‑1 (MQ=14) cAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATCGGTTGTTTCCCAAACCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGc < 5:210749/149‑1 (MQ=255) taacgggtgggtctatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg > 5:300253‑M1/61‑147 (MQ=255) cggcgTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCCTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca > 6:127196/1‑149 (MQ=255) gtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg < 8:6895‑M1/67‑1 (MQ=255) gtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg > 7:6895‑M1/51‑117 (MQ=255) tgctcGCTGTGGGAATGGGGTGTTGCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑c < 6:69904/146‑1 (MQ=255) tcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATaa > 6:82234/1‑149 (MQ=255) tcGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTAGCCGGTAAAT‑ACGCACCTACAGGCCCGG‑ACCCTGCGCGGTCC‑‑‑CCCGGAGGAGCCGGGTTACCCGCCAAGAGGCCGGCACACGCACAAC‑Caaa > 4:130092/1‑146 (MQ=255) cTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAAcc > 7:341228/1‑148 (MQ=255) aaTGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCAtt < 5:82234/149‑1 (MQ=255) gggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCAttttt > 7:216428/1‑149 (MQ=255) gggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCAttttt > 7:210868/1‑149 (MQ=255) gggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTAGCGGGTAAAT‑ACCCTACAACAGGCCCGG‑ACCCTGCGCGGTGC‑‑‑CCCGTAGGAGCGGGTTTACCCCCGAAGAGGCCGCCACAGGCCGAAC‑CATaaccaaaccaaattt > 4:296158/1‑144 (MQ=25) gtttttCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACACGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGt < 8:336250/146‑1 (MQ=255) ccAAAGCGTGATAGCGCCTGCGCCGGCCTCTTAGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGCAG‑CATAACCAAAGCATTTTTTGTTCTTTaa > 8:242349/1‑149 (MQ=255) cAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAAc > 8:252183/1‑149 (MQ=255) cAAAGCGTGATAGCGCCTGCGCCGGCCGCTTAGCCGGGTAAT‑ACGCGCCGACAGGCGCGGCCCCGGGGGGGGGCC‑‑‑CCCGAGGGGCCGGGTTTACCC‑CGGAGAGGGCGGGCCCGGCCGAAGCCAAAACCAAGACATTTTTTTTGTTTTaa > 2:135233/1‑149 (MQ=255) cGTGATCGCGCGTGCGCGGGCCTCTTGGGGGGAAATT‑CCGCTCCTACCGGCGGGT‑ACCGGGCGCGGCCC‑‑‑CCCGTAGTTGGGGGTTTACCGGCTAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGta < 2:204250/149‑1 (MQ=255) gTGATAGCGCCTGCGCCGGCCAATTAGCGGGTAAAT‑CCGCTACAAAAGGCCCGG‑CCCCGGCCCCCTAC‑‑‑CCCCGAGGAGCCGGTTTAACCGCGAAGAGGCCGGCACCAGCACCAG‑CAAAACCCAAACATTTTTTGTTCTTTAAACCgaa > 4:219008/1‑146 (MQ=255) CGGCCTCTTCGCGGGTAAAT‑CCGCTCCTTCAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata > 3:130092‑M1/1‑149 (MQ=255) CGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata > 5:127196‑M1/1‑149 (MQ=255) CGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTtata > 8:341228‑M1/1‑149 (MQ=255) CTTCTCGGGTAAAT‑CCGCTCCTCCAGGCGCGG‑ACCGGGCGCGGCCC‑‑‑CCCGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt > 8:216428‑M1/1‑149 (MQ=255) CTTCGCGGGTAAAT‑CCGCGCCTCCAGGCGCGG‑ACCGGGCGCGGTCC‑‑‑CCCGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt > 8:210868‑M1/1‑149 (MQ=255) gcggggTAAATGCGGCTCCTCCCGGCGGGC‑ACCGGGCGGGGCCC‑‑‑CCGTTCGGTGGGGTTTAACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTg < 3:14745/145‑1 (MQ=255) cgcgGGAAAAG‑CGGCTCCTACCCGCGTGC‑CCGGTCCGGGGTCC‑‑‑CCGTTAGGCGGGGGTTTCCCGGCGAATAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTgg < 5:229441/148‑1 (MQ=255) CGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTg > 3:296158‑M1/1‑147 (MQ=255) CGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCaa < 6:42155‑M1/149‑1 (MQ=255) taAAAT‑CCGCTCCTACCGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCt > 1:135233‑M1/3‑149 (MQ=255) AAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGc < 3:212936‑M1/149‑1 (MQ=255) AT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCACAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGccc < 5:7430‑M1/149‑1 (MQ=255) AT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGccc < 2:4570‑M1/149‑1 (MQ=255) | AATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAT‑CCGCTCCTACAGGCGCGG‑ACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAG‑CATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCC > NC_002947/4896251‑4896546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |