| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,930,141 | G→C | 5.6% | Q11E (CAG→GAG) | cheA ← | chemotaxis histidine kinase CheA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,930,141 | 0 | G | C | 5.6% | 228.1 / 3.0 | 72 | Q11E (CAG→GAG) | cheA | chemotaxis histidine kinase CheA |
| Reads supporting (aligned to +/- strand): ref base G (37/31); new base C (2/2); total (39/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.59e-01 | |||||||||||
AGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATGT > NC_002947/4929993‑4930289 | aGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTg < 4:218936/149‑1 (MQ=255) gCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgg < 8:54927/149‑1 (MQ=255) cTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 5:174310/149‑1 (MQ=255) cTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTg > 5:280922/1‑147 (MQ=255) cTGAAGGAAGCCGCCGCCCCCTTTTACACTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCAGCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTgga < 2:108195/149‑1 (MQ=255) tGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTggag > 3:306620/1‑149 (MQ=255) gaaggaagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTggagg > 6:32483/1‑149 (MQ=255) gaagCCGGCGCCTCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGAttt > 3:71635/1‑149 (MQ=255) aagCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATttc < 5:32483/149‑1 (MQ=255) agCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGGTCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATttct < 3:17071/149‑1 (MQ=255) gCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcct < 5:379275/149‑3 (MQ=255) cccTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGgcgc > 3:114436/1‑149 (MQ=255) cccTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTAGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATGCTGGAGGATTTCTTCATCGgcgc > 7:277059/1‑149 (MQ=255) ttttACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcct > 1:59053/1‑135 (MQ=255) ttttACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTCCAGGATttcct < 2:59053/137‑3 (MQ=255) aCAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGc < 2:135883/148‑1 (MQ=255) tgtgGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCtcat > 1:260047/1‑148 (MQ=255) gAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAAc > 4:88663/1‑149 (MQ=255) cgcgAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCt > 5:86664/1‑149 (MQ=255) cgcgAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCAGAAGCTCTTCAAACGTTCt > 8:145632/1‑149 (MQ=255) aaGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTa < 6:280922/149‑1 (MQ=255) tCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTaaaaa < 8:206380/149‑1 (MQ=255) atgTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGa < 3:113057/147‑1 (MQ=255) ggTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAc < 2:359188/149‑1 (MQ=255) ggTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAc < 2:260047/149‑1 (MQ=255) ggCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagca < 3:88663/149‑1 (MQ=255) ggCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagca < 4:114436/149‑1 (MQ=255) gTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatca < 3:159162/148‑1 (MQ=255) cAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcatc > 2:306730/1‑148 (MQ=255) gTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGat > 2:306321/1‑141 (MQ=255) gTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTAATTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGat < 1:306321/141‑1 (MQ=255) cGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcatc < 1:190904/143‑1 (MQ=255) cGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGatcatc > 2:190904/1‑143 (MQ=255) ggCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCg > 8:23107/1‑149 (MQ=255) gCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCg > 4:119976/1‑148 (MQ=255) cTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTc < 6:163278/149‑1 (MQ=255) cAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGa < 4:71635/148‑1 (MQ=255) cAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGAc < 3:119976/149‑1 (MQ=255) gaacAGTTGCTCGGACAATTGCTCAAGTATTTCGCCTGCCTCTACCAGGAAATCCTGGAGGATTTATTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAGAGAAGATAATCTCATTAGTCATGACCGGac > 8:160831/4‑148 (MQ=255) cAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACacga < 4:306620/149‑1 (MQ=255) aGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACacgac < 5:246584/149‑1 (MQ=255) cTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCg > 8:79856/1‑121 (MQ=255) cTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCg < 7:79856/121‑1 (MQ=255) tCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGac > 5:288259/1‑138 (MQ=255) tCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGac < 6:288259/138‑1 (MQ=255) tgACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTc < 6:86664/146‑1 (MQ=255) gACAATTGCTCAAGTATTTCGACGGCCTCTACCAGGATATCCAGGAGGAGGTCTTCATCGGCGCCGAAGCTCTTCAAGGGTGCTCCGAAAACAGCAAGGGGGGAGGGGCGAGCCTCGCGCTCGTCCTGACGGGACAGGACGTCGTcgcg > 8:133548/1‑149 (MQ=255) aCAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAAGCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACTACGTCTTCACGc > 3:45880/1‑149 (MQ=255) cAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGc > 1:133780/1‑148 (MQ=255) cAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGc < 2:133780/148‑1 (MQ=255) aaTTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCt > 6:340851/1‑148 (MQ=255) ttGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTAt < 5:174920/149‑1 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTc > 3:100354/1‑134 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTc < 4:100354/134‑1 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCgg > 4:71621/1‑148 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCgg > 7:298903/1‑148 (MQ=255) tCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGATCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACTTCTTCACGCTTATCgg > 1:157535/1‑148 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAgg < 3:215925/88‑1 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAgg > 4:215925/1‑88 (MQ=255) aaGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCAt > 5:224375/1‑149 (MQ=255) gTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATg > 4:24410/1‑148 (MQ=255) tATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagc > 8:248932/1‑94 (MQ=255) tATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagc > 8:244008/1‑94 (MQ=255) tATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagc < 7:244008/94‑1 (MQ=255) tATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGAcagc < 7:248932/94‑1 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATc > 3:342493/1‑149 (MQ=255) tttCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATc > 3:17476/1‑149 (MQ=255) cGGCATCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCTTCCTGACCTGACactac > 2:265740/1‑118 (MQ=255) ctctACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCtt > 2:232355/1‑149 (MQ=255) tctACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCTGATCATCGACATCGTCCTGACCGGACACGACGTCtt > 4:371087/1‑118 (MQ=255) tctACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCTGATCATCGACATCGTCCTGACCGGACACGACGTCtt < 3:371087/118‑1 (MQ=255) tACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTc < 4:17476/147‑1 (MQ=255) tACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAc > 5:281657/1‑149 (MQ=255) tACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCAACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGTATCTGCGGACCTTc < 6:335073/147‑1 (MQ=255) tgaagAAATCCTCCAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCAccc > 2:312818/5‑149 (MQ=255) cTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGAt < 1:163903/149‑1 (MQ=255) tGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATg > 5:110107/1‑149 (MQ=255) tGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATg > 1:118707/1‑149 (MQ=255) tGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTAGCGGCATGAATATGCGGACCTTCACCCCGAGTCgtaag > 4:357030/1‑145 (MQ=255) ggaggaTTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATGt > 7:304576/1‑149 (MQ=255) | AGCTGAAGGAAGCCGGCGCCCCCTTTTACAGTGTGGAAACCGCGAAAGATCGCATTGAGCAGGTCGGCATCGTCAGGTCGGCTTTCCAGCTCGACCAGTTGCTCGGACAATTGCTCAAGTATTTCGCCGGCCTCTACCAGGAAATCCTGGAGGATTTCTTCATCGGCGCCGAAGCTCATCAAACGTGCTCCTTAAAAACCAAGGCTGGACAGCAGATCATCGACATCGTCCTGACCGGACACGACGTCTTCACGCTTATCGGCATGAATCTGCGGACCTTCACCCCGAGTCGGATGT > NC_002947/4929993‑4930289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |