| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,935,926 | C→T | 5.9% | G222S (GGT→AGT) | flhA ← | flagellar export pore protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,935,926 | 0 | C | T | 5.9% | 204.2 / 2.3 | 67 | G222S (GGT→AGT) | flhA | flagellar export pore protein |
| Reads supporting (aligned to +/- strand): ref base C (31/32); new base T (2/2); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
CATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGTCGATCAGGCCGG > NC_002947/4935789‑4936072 | cATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCCCCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTtga > 7:33277/1‑149 (MQ=255)cATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTtga > 6:206230/1‑149 (MQ=255) aTGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTtgat < 5:206230/149‑1 (MQ=255) tGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTtgatg < 5:348658/149‑1 (MQ=255) tCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAAc < 2:10785/149‑1 (MQ=255) gcggcggcgGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACa < 1:237500/148‑1 (MQ=255) gcggcggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCGTGCCGATGAGCATGCCACTGATC‑A‑GGTtgatg > 2:43405/1‑141 (MQ=255) gcggcggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCGTGCCGATGAGCATGCCACTGATC‑A‑GGTtgatg > 2:37901/1‑141 (MQ=255) gcggcggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCGTGCCGATGAGCATGCCACTGATC‑A‑GGTtgatg < 1:37901/141‑1 (MQ=255) gcggcggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCGTGCCGATGAGCATGCCACTGATC‑A‑GGTtgatg < 1:43405/141‑1 (MQ=255) ggcggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCa < 7:164621/149‑1 (MQ=255) ggTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGc > 4:342026/1‑148 (MQ=255) gTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGc > 7:352422/1‑147 (MQ=255) aTGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTcg > 2:299903/1‑149 (MQ=255) cAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGAt > 5:31433/1‑138 (MQ=255) cAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGAt < 6:31433/138‑1 (MQ=255) cAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTcgccgc > 4:4224/1‑149 (MQ=255) aaTTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAACAAGCCGGCGATGGCGTCGCcgcg < 4:169224/149‑1 (MQ=255) gcgcCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCAc < 3:4224/148‑1 (MQ=255) gcgcCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCAc < 3:342026/148‑1 (MQ=255) cgcCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGa < 2:347442/149‑1 (MQ=255) accaAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACtt > 2:246244/1‑149 (MQ=255) caAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGc > 4:93268/1‑149 (MQ=255) aaaCCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCt < 5:142473/149‑1 (MQ=255) aCCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTgg < 6:1890/149‑1 (MQ=255) ccGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGc > 2:142991/1‑149 (MQ=255) cGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGGAGCATGCCGATCAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCa < 1:343716/149‑1 (MQ=255) gTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCAc > 8:237214/1‑149 (MQ=255) tCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCAcc > 7:241734/1‑149 (MQ=255) tCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCAcc > 3:147697/1‑149 (MQ=255) aCCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGt < 1:114424/149‑1 (MQ=255) ccGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTc < 2:159383/149‑1 (MQ=255) cGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTc > 8:200698/1‑148 (MQ=255) aTGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCAt > 7:286934/1‑149 (MQ=255) aTGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCAt > 1:250834/1‑149 (MQ=255) gTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGa < 8:241734/149‑1 (MQ=255) tCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAg > 2:163726/1‑149 (MQ=255) tCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAg > 1:337841/1‑149 (MQ=255) agGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTa < 4:147697/149‑1 (MQ=255) agGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTa < 8:352422/149‑1 (MQ=255) gCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATCTAGGGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCg > 1:115924/1‑146 (MQ=255) gCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATg > 7:232470/1‑102 (MQ=255) gCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATg < 8:232470/102‑1 (MQ=255) cATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAAc > 1:263043/1‑149 (MQ=255) tAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTc < 2:272848/149‑1 (MQ=255) aCCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGc > 8:49801/1‑149 (MQ=255) aCCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGc < 8:286934/149‑1 (MQ=255) ccTTGCCGGCCTCGGTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGc < 3:38626/148‑1 (MQ=255) ccTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGcc > 1:14218/1‑149 (MQ=255) ccGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCTTCGAGCCGTAGAACTCGGCCTCCTg > 8:231406/1‑149 (MQ=255) ccTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGcc > 2:176295/1‑149 (MQ=255) gCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCt < 8:33277/149‑1 (MQ=255) aCATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCAcgg < 7:29304/149‑1 (MQ=255) cATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCAcggc > 7:118719/1‑149 (MQ=255) atatTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCAcggcg > 8:8735/1‑149 (MQ=255) atTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGt > 1:59757/1‑149 (MQ=255) atTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGt > 4:250519/1‑149 (MQ=255) ttGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTg > 4:35568/1‑149 (MQ=255) gtgCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGc < 2:263043/148‑1 (MQ=255) cGATGAGCATGCGACCGCTC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCACGGCACGGCGGTGCTTGgcctgggcctgg < 8:28163/149‑1 (MQ=255) gATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGt < 2:115924/149‑1 (MQ=255) gATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGt < 3:35568/149‑1 (MQ=255) aTGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGTc < 5:158914/149‑1 (MQ=255) aGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGTCGa < 1:163726/148‑1 (MQ=255) aTGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCGTGGCCTGGGCCTGGTCGATCAg < 7:237214/149‑1 (MQ=255) cACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCATGGCCTGGGCCTGGTCGATCAGGCCg > 5:374163/1‑149 (MQ=255) aCCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGTCCTGGTCGATCAGGCCgg < 7:200698/149‑1 (MQ=255) | CATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATGCCGATGAGCATGCCACCGATC‑A‑GGTTGATGAACAGGATCAGCAAGCCGGCGATGGCGTCGCCGCGCACGAACTTGCTGGCACCGTCCATCGAGCCGTAGAACTCGGCCTCCTGCGCCACCTCGGCACGGCGGTGCTTGGCCTGGGCCTGGTCGATCAGGCCGG > NC_002947/4935789‑4936072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |