Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,978,420 G→T 6.9% S60R (AGC→AGA)  flgH ← flagellar L‑ring protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,978,4200GT 6.9% 177.3 / 3.9 58S60R (AGC→AGA) flgHflagellar L‑ring protein
Reads supporting (aligned to +/- strand):  ref base G (27/27);  new base T (2/2);  total (29/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.55e-01

GGGCGTGCTACCAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAGCAACACCGCCCC  >  NC_002947/4978279‑4978566
                                                                                                                                              |                                                                                                                                                   
gggCGTGCTACCAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTAc                                                                                                                                               <  5:287569/148‑1 (MQ=255)
 ggCGTGCTACCAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACa                                                                                                                                              <  7:90316/148‑1 (MQ=255)
          ccAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTc                                                                                                                                    <  2:114540/149‑1 (MQ=255)
          ccAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTc                                                                                                                                    <  2:82344/149‑1 (MQ=255)
           cAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTc                                                                                                                                    >  8:273337/1‑148 (MQ=255)
            aaaCAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCg                                                                                                                                   >  1:342629/1‑148 (MQ=255)
                aGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAAcc                                                                                                                              >  5:209734/1‑149 (MQ=255)
                 gCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCg                                                                                                                             <  5:384811/149‑1 (MQ=255)
                   gAAGTCAGGCCGATGTCGGTCTTGCTGGACTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGc                                                                                                                           >  1:212584/1‑149 (MQ=255)
                     aGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCt                                                                                                                         >  2:90435/1‑149 (MQ=255)
                        cAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTgg                                                                                                                       >  3:297818/1‑148 (MQ=255)
                             cGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTgg                                                                                                                       >  4:253590/1‑143 (MQ=255)
                              gATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGGTAACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATc                                                                                                                 <  1:91520/149‑1 (MQ=255)
                               aTGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGa                                                                                                               <  2:234411/149‑1 (MQ=255)
                                    ggTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCTCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCgt                                                                                                          >  5:203747/1‑149 (MQ=255)
                                    ggTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCTCTGTACAGGTTCTGCTCGAAAACGGCCTGGTAGATCGAAGCgt                                                                                                          >  5:208876/1‑149 (MQ=255)
                                      tCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCgt‑tg                                                                                                       >  2:64094/1‑149 (MQ=255)
                                      tCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCgt‑tg                                                                                                       <  2:212584/149‑1 (MQ=255)
                                                     ccaTCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTCGTAGATCGAACCGT‑TGTTGGCCGCTGCCgg                                                                                         <  1:30682/146‑1 (MQ=255)
                                                                 ccGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATCATGTCACCAACCCGG‑AACGCCTTGCGGACGCTGTACAGGTTCTGCTCGAAACCGGCAAGGTAGATCGAACCTT‑TGTTAGACGATGCCGCCAACGGGGTgcgc                                                                            >  7:52716/1‑149 (MQ=255)
                                                                   gcgTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAAc                                                                                                             <  4:47925/115‑1 (MQ=255)
                                                                   gcgTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAAc                                                                                                             >  3:47925/1‑115 (MQ=255)
                                                                   gcgTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCgg                                                                          >  2:73163/1‑149 (MQ=255)
                                                                    cgTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCTCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGc                                                                         <  6:203747/149‑1 (MQ=255)
                                                                    cgTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGc                                                                         <  6:25294/149‑1 (MQ=255)
                                                                    cgTTCTTGCTGGCGGACGTGAGCGAATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCTCTGTACAGGTTCTGCTCGAAACCGGGCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGTGGTGCGCGGc                                                                         <  6:208876/149‑1 (MQ=255)
                                                                     gTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCa                                                                        <  5:53122/149‑1 (MQ=255)
                                                                         ttGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAacac                                                                    >  7:213481/1‑149 (MQ=255)
                                                                               gCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGgc                                                                <  1:90435/147‑1 (MQ=255)
                                                                                        cgcTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACgg                                                     >  1:351343/1‑149 (MQ=255)
                                                                                        cgcTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACgg                                                     <  6:209734/149‑1 (MQ=255)
                                                                                         gcTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCATCACCGGCGCATAGTACggg                                                    >  7:343071/1‑149 (MQ=255)
                                                                                           tCATTGAGCGTGATGGTGAGGATGTCACCCACACGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTTCCGGCACCGGGGTGCGCGGCAACACCGGCGCTGAGTCCGGGTc                                                  >  4:190919/1‑149 (MQ=255)
                                                                                             aTTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGt                                                <  3:331824/149‑1 (MQ=255)
                                                                                             aTTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGt                                                >  8:280318/1‑149 (MQ=255)
                                                                                                gAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttg                                              <  8:52716/148‑1 (MQ=255)
                                                                                                 aGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgg                                             <  6:249935/148‑1 (MQ=255)
                                                                                                    gtgattgtgatgAGGTCACCCACCCGG‑AACGCGTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgggctt                                         <  2:342629/149‑1 (MQ=255)
                                                                                                     tgatggtgatgATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgggcttg                                        >  6:17892/1‑149 (MQ=255)
                                                                                                       atggtgatgATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgggcttgg                                       <  7:273337/148‑1 (MQ=255)
                                                                                                               gatgTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTg                              >  1:232218/1‑149 (MQ=255)
                                                                                                                   tCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGa                           <  4:297818/148‑1 (MQ=255)
                                                                                                                   tCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGa                           <  2:351343/148‑1 (MQ=255)
                                                                                                                   tCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGAc                          >  5:115629/1‑149 (MQ=255)
                                                                                                                   tCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGAc                          >  6:29909/1‑149 (MQ=255)
                                                                                                                       ccacccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgg                                             >  8:223124/1‑126 (MQ=255)
                                                                                                                       ccacccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGttgg                                             <  7:223124/126‑1 (MQ=255)
                                                                                                                        cacccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAAc                     <  1:64094/149‑1 (MQ=255)
                                                                                                                         acccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAAcc                    >  4:29132/1‑149 (MQ=255)
                                                                                                                           ccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTg                  >  5:52198/1‑149 (MQ=255)
                                                                                                                           ccGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTg                  <  3:186398/149‑1 (MQ=255)
                                                                                                                                aaCGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAg              <  2:232218/149‑1 (MQ=255)
                                                                                                                                    ccTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCt                   <  5:348343/140‑1 (MQ=255)
                                                                                                                                    ccTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCt                   >  6:348343/1‑140 (MQ=255)
                                                                                                                                     cTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGTAGGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAGCatc          >  1:284813/1‑147 (MQ=255)
                                                                                                                                      ttGCGCTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTAGGGCGTCGGTGCGACGCAACCTGCCAGCAacac        >  5:246118/1‑149 (MQ=255)
                                                                                                                                         cGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAGCAACACCg      <  5:17892/148‑1 (MQ=255)
                                                                                                                                            tCGCTGTACAGGTTCTGCTCGAAACTGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAGCAACACCGcccc  >  3:235251/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
GGGCGTGCTACCAAACAGCGAAGTCAGGCCGATGTCGGTCTTGCTGGTCTTGGCGATCTGCGAGCCCGCGTTCTTGCTGGCGGACGTGCGCTCATTGAGCGTGATGGTGATGATGTCACCCACCCGG‑AACGCCTTGCGGTCGCTGTACAGGTTCTGCTCGAAACCGGCCTGGTAGATCGAACCGT‑TGTTGGCCGCTGCCGGCAACGGGGTGCGCGGCAACACCGGCGCATAGTACGGGTCGTTGGGCTTGGGCGTCGGTGCGACGCAACCTGCCAGCAACACCGCCCC  >  NC_002947/4978279‑4978566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑