| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,077,234 | G→T | 6.0% | intergenic (+29/+79) | PP_4470 → / ← mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,077,234 | 0 | G | T | 6.0% | 258.7 / 3.8 | 80 | intergenic (+29/+79) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (34/41); new base T (3/2); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 | |||||||||||
CCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGA > NC_002947/5077094‑5077380 | ccTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCACGCGAACACGAAAAAGCCAGCGTAAGCt < 1:206451/148‑1 (MQ=255) cTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGACCCACAGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGAAGTGCAAATGGCCG‑CAGACGCCACCTGAGGGATGCA‑GCGAACACGAAAAAGCAAGCGAAAGATGGc > 7:155669/1‑149 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCTCCAACTGTCCCTCCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACTCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgtg < 8:155669/149‑1 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACAAAAAAGCCAGCTTACGCTGGCTTTTTcgtg < 6:164637/149‑1 (MQ=255) cgcgAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCGCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTtgtg < 8:124362/149‑1 (MQ=255) gcgAGGTGCTGCACCGTTTCCGCCAACTGTCCCACCGCCAGCAGCACGCCTTGGGCGCCCTCCTCCCTCACGATGGGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTgg < 5:278656/149‑1 (MQ=255) gcAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACt > 2:299/1‑149 (MQ=255) ctggctttGCGCCAACTTTCCAACCGCCAGCCGCACGCCTTGGTCGCCCTCATCGCTCACTATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGATCACGAAAAAGCCAGCGTAAGATGGCTTTTTTGTGGGCGTCTGAc < 6:263292/142‑1 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTg > 8:70795/1‑149 (MQ=255) cAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTg < 2:151322/149‑1 (MQ=255) ttCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACAAAAAAGCCAGCTTACGCTGGCTTTTTcgtg > 8:265615/1‑131 (MQ=255) ccGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCaa < 1:131248/148‑1 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCTTACGCTGGCtttttc > 7:254350/1‑124 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCTTACGCTGGCtttttc < 8:254350/125‑2 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAgg < 1:94727‑M2/149‑3 (MQ=255) cGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAg > 1:287313‑M2/1‑147 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggc < 8:127117‑M2/149‑4 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggc > 6:297956‑M2/1‑146 (MQ=255) gCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggc < 4:217895‑M2/149‑4 (MQ=255) cTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCttt < 6:172833/116‑1 (MQ=255) cTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCttt > 5:172833/1‑116 (MQ=255) gTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttcc < 3:23319‑M2/149‑11 (MQ=255) tCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttc > 4:290000‑M2/1‑138 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTg > 1:44309/1‑149 (MQ=255) ccACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTg > 3:42536/1‑149 (MQ=255) cGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCggg < 5:103444/149‑1 (MQ=255) gcagAACGCCTTGGTCGCCCTCATCACTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGt > 5:34867/1‑149 (MQ=255) cagAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGtt < 5:208048/149‑1 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CCGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg < 8:328994/140‑1 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCgg > 7:328994/1‑140 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTcc > 4:214586/1‑149 (MQ=255) gAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTATGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTcc < 1:83181/149‑1 (MQ=255) aCGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCca > 5:60436/1‑149 (MQ=255) gCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGAGGGATTGTTCCca > 7:262354/1‑147 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAgg > 2:101935/1‑149 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAgg > 6:359694/1‑149 (MQ=255) cTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAgg < 8:173531/149‑1 (MQ=255) ggTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGgga < 3:103769/148‑1 (MQ=255) tCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGggagga > 7:163281/1‑149 (MQ=255) cccTCATCGCTCACGATGTGGAAATGGCCGCCAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGAtt > 1:227526/1‑149 (MQ=255) cccTCATCGCTCACGATGTGGAAATGGCCA‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTg > 1:27513/1‑149 (MQ=255) ccTCATCACTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTgg < 6:34867/149‑1 (MQ=255) tCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg > 6:42020/1‑122 (MQ=255) tCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCg < 5:42020/122‑1 (MQ=255) tCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTac < 6:60436/149‑1 (MQ=255) cTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaac < 4:30002/149‑1 (MQ=255) tCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctgg < 3:45072‑M2/149‑50 (MQ=255) tCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaa > 3:200667/1‑147 (MQ=255) aCGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTacaaca < 4:23319/147‑1 (MQ=255) aCGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAgg < 3:217895/149‑1 (MQ=255) aCGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAg > 6:236527/1‑148 (MQ=255) aTGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAAc < 2:27513/149‑1 (MQ=255) tgGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtggg < 7:104760‑M2/148‑57 (MQ=255) gAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtggga < 3:3090‑M2/147‑58 (MQ=255) gAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCg < 7:70795/148‑1 (MQ=255) gAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt > 3:157442/1‑149 (MQ=255) gAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGt < 7:127117/149‑1 (MQ=255) aaTGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTgg < 2:44309/149‑1 (MQ=255) aaTGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTg < 5:274284/148‑1 (MQ=255) aTGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTgg > 8:255656/1‑148 (MQ=255) ccG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGc < 3:214586/149‑1 (MQ=255) gCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAgg > 7:118348/1‑126 (MQ=255) gCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAgg < 8:118348/126‑1 (MQ=255) cctGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt > 2:15215/1‑148 (MQ=255) ctGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAt < 2:227526/147‑1 (MQ=255) ctGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 5:338335/1‑148 (MQ=255) ctGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATg > 2:320106/1‑148 (MQ=255) tGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGa > 4:154793/1‑142 (MQ=255) tGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGa < 3:154793/142‑1 (MQ=255) aGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaa < 8:163281/147‑1 (MQ=255) ggCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTTGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATgaagaa < 7:255656/148‑1 (MQ=255) cA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAaccacc < 4:42536/149‑1 (MQ=255) cGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAAAAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCt > 4:222457/1‑149 (MQ=255) gAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTg > 3:57112/1‑149 (MQ=255) acGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCgg < 4:200667/149‑1 (MQ=255) aGCCAGCTTACGCTGGCTTTTTCGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCAcag > 8:208803/1‑148 (MQ=255) ccAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCAcagcag > 1:183595/1‑149 (MQ=255) cAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGt < 1:299/149‑1 (MQ=255) aGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGt > 2:45210/1‑148 (MQ=255) gCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAggccatttccacatcgtgagcgatgagggcgaccaaggcgttctgctggcggtgggacagttggcggaaacgctgcagcaactcgcgctcatgcagggacagttcaggg > 4:45072‑M2/1‑40 (MQ=255) | CCTGCATGAGCGCGAGTTGCTGCAGCGTTTCCGCCAACTGTCCCACCGCCAGCAGAACGCCTTGGTCGCCCTCATCGCTCACGATGTGGAAATGGCCG‑CAGACGCCTCCTGAGGGCTGCA‑GCGAACACGAAAAAGCCAGCGTAAGCTGGCTTTTTTGTGGGCGTCTGACTGGCAGCAAGGCCATTTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGA > NC_002947/5077094‑5077380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |