| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,078,877 | G→C | 6.8% | intergenic (‑122/+275) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,078,877 | 0 | G | C | 6.8% | 270.6 / 7.2 | 87 | intergenic (‑122/+275) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base G (40/41); new base C (2/4); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01 | |||||||||||
GCTTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTG > NC_002947/5078730‑5079020 | gcTTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCcggc > 8:63495/1‑149 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCcggcgg < 2:64823/147‑1 (MQ=255) tttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCgggg < 6:379812/148‑1 (MQ=255) tttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTCTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGc > 3:226546/1‑149 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt < 8:139972/149‑4 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttg < 6:256848/148‑3 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttg < 7:8947/148‑3 (MQ=255) cTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACg > 5:288969/1‑149 (MQ=255) ttCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGGATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACgg > 2:291060/1‑149 (MQ=255) cTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGATTCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACgg < 7:184957/147‑1 (MQ=255) cTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACgg < 5:177423/147‑1 (MQ=255) cTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACgg > 6:177423/1‑147 (MQ=255) ttCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCaa > 8:93244/1‑149 (MQ=255) ttCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCaa > 4:79496/1‑149 (MQ=255) cGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAAt < 7:63495/148‑1 (MQ=255) ggTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATc < 3:169099/148‑1 (MQ=255) aTAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATac < 5:335365/148‑1 (MQ=255) tAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATacac < 1:241239/149‑1 (MQ=255) aGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATAGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACt > 6:251606/1‑149 (MQ=255) ggCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTg > 7:24634/1‑149 (MQ=255) cGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAAACGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCt < 5:319990/149‑1 (MQ=255) gAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTa < 4:306901/149‑1 (MQ=255) ctccactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAg < 1:9132/149‑1 (MQ=255) tccactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt < 7:152012/124‑4 (MQ=255) tccactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgt > 8:152012/1‑121 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTg > 6:1124/1‑149 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCCTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTg > 7:218690/1‑149 (MQ=255) actccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGTTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt < 6:102442/149‑1 (MQ=255) ctccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTc < 5:1124/149‑1 (MQ=255) tccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGAGTTAGCGAGTAACTACTGGGTAATTCCATGGGGGTTTTCCACAAGCCCCGGCGGCGCTGACGGGCGCAATAATACAAAGATAAAGCAGt > 2:324638/1‑147 (MQ=255) gcagcGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCg < 4:324243/149‑1 (MQ=255) aCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAAATACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttt < 1:324638/148‑1 (MQ=255) cGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 7:279978/149‑1 (MQ=255) cGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 6:288969/149‑1 (MQ=255) cGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 5:306955/149‑1 (MQ=255) cGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 4:78943/149‑1 (MQ=255) cGCCGAGGGAATCAATCGGTCAGATCCTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 8:218690/149‑1 (MQ=255) gCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGTGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTg > 8:31768/1‑149 (MQ=255) ggAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAg > 7:2967/1‑148 (MQ=255) caatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATc < 4:340515/101‑1 (MQ=255) caatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATc > 3:340515/1‑101 (MQ=255) aatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATc > 5:109171/1‑149 (MQ=255) aatcGCGCAGATCTTTCTGTATGAATCGTCGTATCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTCCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATc < 8:162519/149‑1 (MQ=255) aGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgcgc < 6:109171/149‑1 (MQ=255) cTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGAt > 3:105546/1‑148 (MQ=255) tCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATa < 2:334118/146‑1 (MQ=255) tGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCAACAAGCCCCTGCGGGGCTGACGGGGGCAATCATACACTGCTAAAGCTGTCAGTTCGCTTATATTTTTGGCCAGAACAATCCTTGGCGCGATAAAGCt > 8:342042/1‑149 (MQ=255) tATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg > 1:260904/1‑149 (MQ=255) aTGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATTGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg < 3:256538/148‑1 (MQ=255) tGAATCGTGTTAGCGAGTAACTACTTGGTAAGTCCATTGTGTTTTTCCTCAAGCCCCGGCGGGGCTGTCGGGCGCAATCTTACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCTTTTGCGCGATAAAGCTggg < 4:226546/148‑1 (MQ=255) tGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGa > 4:97462/1‑149 (MQ=255) tGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGa > 4:52538/1‑149 (MQ=255) gtgtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt < 4:252752/91‑1 (MQ=255) gtgtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt > 3:252752/1‑91 (MQ=255) gtgtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAAcgc > 8:30365/1‑149 (MQ=255) gtgtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAAcg < 8:24634/148‑1 (MQ=255) aGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGa < 4:360571/148‑1 (MQ=255) gAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg > 2:315879/1‑133 (MQ=255) gAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGc > 4:81188/1‑148 (MQ=255) gTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgcg < 6:134679/119‑1 (MQ=255) gTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgcg < 8:239061/119‑1 (MQ=255) tAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTAt > 2:205211/1‑148 (MQ=255) actactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCa < 1:291060/148‑1 (MQ=255) ctactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAATGCGTGAAGCTATCAGt < 4:105546/149‑1 (MQ=255) tactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTg > 3:237284/1‑149 (MQ=255) ctGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGc > 8:109706/1‑148 (MQ=255) ctGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGAGAAAGCTGGGACAACGCGTGAAGCTATCAGTGc > 8:182657/1‑148 (MQ=255) ctGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGGTTGCGCGATAAAGCTGGGACACCGCGTGAAGCTATCAGt > 4:281318/1‑146 (MQ=255) ggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 5:308238/89‑1 (MQ=255) ggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt > 6:308238/1‑89 (MQ=255) ggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcgac > 1:196709/1‑148 (MQ=255) aGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGATTGCGCGATAAAGCTGTGACAACGCTTGAACATATCAGTGCTACGAttg > 3:213901/1‑149 (MQ=255) tCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAttgtt > 4:142639/1‑149 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTAt < 2:26523/131‑1 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTAt > 1:26523/1‑131 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAttgttg < 2:260904/148‑1 (MQ=255) cATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATtgttgt < 7:93244/149‑1 (MQ=255) aTGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTtgtg > 1:213280/1‑149 (MQ=255) tggtggTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCTGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCACGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTgg > 2:317383/1‑149 (MQ=255) ggtggtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTgg < 4:237284/148‑1 (MQ=255) tggtTTTCCACAAGCCCCGGCGGGGCTGACGGGGGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGTGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATg < 5:251606/149‑1 (MQ=255) ggctttCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg > 8:51286/4‑149 (MQ=255) ttttCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATggg > 7:122873/1‑148 (MQ=255) ttttCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCGGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATggg > 6:178561/1‑148 (MQ=255) ccgtcaGCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAg > 5:385953/6‑148 (MQ=255) caAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcaca < 3:79496/149‑1 (MQ=255) aaGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt > 2:85220/1‑65 (MQ=255) ccccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTg < 4:141525/149‑1 (MQ=255) ccccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTATGCGCGATAAAGCTGGGACAACGCGTGTAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTg < 1:100241/149‑1 (MQ=255) | GCTTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTG > NC_002947/5078730‑5079020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |