| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 380,681 | C→G | 5.2% | C326W (TGC→TGG) ‡ | gbcB → | glycine‑betaine dioxygenase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 380,681 | 0 | C | G | 5.2% | 248.7 / 3.0 | 77 | C326W (TGC→TGG) ‡ | gbcB | glycine‑betaine dioxygenase subunit |
| Reads supporting (aligned to +/- strand): ref base C (36/37); new base G (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.33e-01 | |||||||||||
TGGATGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGC > NC_002947/380536‑380828 | tGGATGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAg > 7:287071/1‑149 (MQ=255)tGGATGTTTCAGCCCTCAACCTGGTGGAGTTAATCGGAAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCTGAGGCAGCCAAGGGTGGCCTGATGATCCCGAACGCCTGCGGAATGGGTATCTGAGGCACCTGCAAg > 5:200738/1‑149 (MQ=255) gATGTTTCCGACGTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAgg < 3:223709/148‑1 (MQ=255) gATGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAgg < 4:67561/148‑1 (MQ=255) tgtgTCCGACCTCCACCTGGTGGACTGCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCAGGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGc < 4:44833/149‑1 (MQ=255) tGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGc < 5:139548/149‑1 (MQ=255) tGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGc < 3:146813/149‑1 (MQ=255) tttCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTc < 2:76474/149‑1 (MQ=255) tCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCa > 2:91419/1‑148 (MQ=255) cTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTTGCAGGTGccgca > 1:123467/1‑139 (MQ=255) cTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTTGCAGGTGccgca < 2:123467/143‑5 (MQ=255) tCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGggc > 8:171235/1‑149 (MQ=255) aaCCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGggc < 6:312201/147‑1 (MQ=255) aCCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGggcggc > 1:222589/1‑149 (MQ=255) ccTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCCGGGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGggcggc > 1:77634/1‑149 (MQ=255) ccTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGggcggc > 5:210717/1‑148 (MQ=255) gAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTgg < 6:307795/148‑1 (MQ=255) ttCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAAt > 3:363995/1‑149 (MQ=255) cATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATg < 2:222589/148‑1 (MQ=255) aTCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGAACCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCACAAACTGGCCGGCCAGGTGGaaag > 7:56669/1‑145 (MQ=255) tCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAg > 4:82170/1‑149 (MQ=255) cGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGCTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAg > 1:304871/1‑148 (MQ=255) gCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGcac < 6:210717/149‑1 (MQ=255) gCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGca > 1:153729/1‑148 (MQ=255) gaagaGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAAcggcg > 5:312239/1‑149 (MQ=255) gaagaGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAAcggcg < 7:171235/149‑1 (MQ=255) aagaGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAAcggcgg > 5:60281/1‑149 (MQ=255) gagCCTCCGCCTCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGTTTGGCTTTATGATCACGAAAGCCTTCGGCATGGTTATCTGCGGCACCTGCAAGTTGCTCAAACTGGGCGGCGAGGTGGAACTGGAGCACAACGTAGGGa < 6:200738/149‑1 (MQ=255) gagCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATg < 2:311174/133‑1 (MQ=255) gagCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATg > 1:311174/1‑133 (MQ=255) cATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTTGCAGGTGccgc < 4:66464/107‑4 (MQ=255) cATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTTGCAGGTGccgc > 3:66464/1‑104 (MQ=255) cATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTgg < 6:213400/113‑1 (MQ=255) cATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTgg > 5:213400/1‑113 (MQ=255) aTCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTAc > 5:101743/1‑149 (MQ=255) tCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTAcc < 8:287071/149‑1 (MQ=255) cGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCg > 4:284958/1‑148 (MQ=255) aTCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGaa > 2:82940/1‑147 (MQ=255) aTCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAaga < 7:270476/149‑1 (MQ=255) aTCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCGGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGaa > 6:314335/1‑147 (MQ=255) tCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAagag > 5:306273/1‑149 (MQ=255) catccc‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAagag < 3:255140/145‑1 (MQ=255) gCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGa > 7:182251/1‑149 (MQ=255) ccc‑GCGCCAGACCGTGCATGCGGCGGCAGCCAAGCTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGCTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCCAAGAGCAc > 4:171737/1‑148 (MQ=255) ggCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGc < 6:306273/149‑1 (MQ=255) cGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGc > 6:372033/1‑148 (MQ=255) tGCATGCGGCGGCAGCCAAGGGTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTAc < 6:101743/149‑1 (MQ=255) cATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACAt > 6:228334/1‑149 (MQ=255) aTGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCGGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATc < 5:314335/149‑1 (MQ=255) ggcggcAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGt > 3:367962/1‑149 (MQ=255) gcAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGtg < 2:153729/149‑1 (MQ=255) gcAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGtg < 2:304871/149‑1 (MQ=255) gCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGtgctg < 4:367962/149‑1 (MQ=255) cAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGtgctg > 3:99101/1‑147 (MQ=255) aaGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAg < 3:84282/149‑1 (MQ=255) aGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCTGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGc < 1:91419/149‑1 (MQ=255) gCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGcc > 8:326599/1‑148 (MQ=255) gCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGCGCGGCGAGGTGGAAATTGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGcc < 5:372033/148‑1 (MQ=255) ccTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGTCTACATCCTGTCGTGCTGCAGCGTGCCGa < 8:184642/149‑1 (MQ=255) atgatCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAgg < 6:60281/149‑1 (MQ=255) atgatCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAgg < 1:82940/149‑1 (MQ=255) aaaGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGc < 7:216180/129‑1 (MQ=255) aaaGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGc > 8:216180/1‑129 (MQ=255) gCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGAt < 3:82170/149‑1 (MQ=255) gCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGAt < 4:363995/149‑1 (MQ=255) cagCGGCATGCGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTCCAAATGCAGCACAACGGCGGGATTACCGAAGAGGAAGAAGCAGAGCGCTACATCCAGTCGTGATGCAGCTTGCCGAAAGCGGATCTGCGGATc > 3:270942/3‑148 (MQ=255) tGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGc < 3:328375/142‑1 (MQ=255) tGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGc > 4:328375/1‑142 (MQ=255) cGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGAt < 3:270976/148‑1 (MQ=255) ggCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTa < 7:138938/149‑1 (MQ=255) aTGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGCACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACt > 5:205893/1‑148 (MQ=255) ctgctgCACCTGCAAGGTGCTCAAACTGGTCGGCGAGGTGGAAATGGTGCAGAACGGCGGGATTACAGAAGAGGACGAAGCCGAGGGCTAGATCGTGTCGTGCTGCAGCGTGGCGAAAGGGGATGTGCGGATGGATTAGTGATCCAGt < 3:171737/148‑1 (MQ=255) tGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTgg > 8:52584/1‑149 (MQ=255) gCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGc > 5:8558/1‑149 (MQ=255) cGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGt < 2:77634/145‑1 (MQ=255) cTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCTGTGGCCAGTCTg > 4:211672/1‑149 (MQ=255) gCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGc > 1:8740/1‑149 (MQ=255) | TGGATGTTTCCGACCTCAACCTGGTGGAGTTCATCGGCAGCGAGAAGAGCATCCGCATCGCCCC‑GGGCGAGACCGTGCATGCGGCGGCAGCCAAGGTTGGCCTGATGATCCCGAAAGCCTGCGGCATGGGTATCTGCGGCACCTGCAAGGTGCTCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGC > NC_002947/380536‑380828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |