| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,100,547 | C→T | 5.9% | E360E (GAG→GAA) | phhR ← | sigma‑54 dependent transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,100,547 | 0 | C | T | 5.9% | 258.4 / 3.8 | 84 | E360E (GAG→GAA) | phhR | sigma‑54 dependent transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (37/42); new base T (2/3); total (39/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
TGCCAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGCGCGGGCT > NC_002947/5100400‑5100690 | tGCCAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACt < 2:270370/149‑1 (MQ=255)tGCCAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACt < 7:32921/149‑1 (MQ=255) ccAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTc < 7:94713/148‑1 (MQ=255) ccAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCg > 5:184415/1‑149 (MQ=255) cAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGc < 6:184415/149‑1 (MQ=255) cAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGc > 2:328328/1‑149 (MQ=255) ggCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCa > 6:93912/1‑149 (MQ=255) ggCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCa > 8:34404/1‑149 (MQ=255) gcgcGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAGTTTCGCCag > 6:193893/1‑148 (MQ=255) gcgcGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCAc < 6:126135/149‑1 (MQ=255) gcgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACgg < 5:93912/149‑1 (MQ=255) gcgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACgg < 3:210119/149‑1 (MQ=255) cgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAGTTTCGCCaggac < 5:193893/149‑5 (MQ=255) cgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACggg < 6:147030/149‑1 (MQ=255) cgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACggg < 7:77936/149‑1 (MQ=255) cgGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACggg > 8:77936/1‑149 (MQ=255) ggCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAGTTTCGCCaggacc < 1:114928/149‑6 (MQ=255) ggCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGc > 8:55545/1‑149 (MQ=255) cATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGcac < 3:72031/149‑1 (MQ=255) aGCCAATCTGCCGACTGGCCTGATCGAGAAACTGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCg < 8:229346/149‑1 (MQ=255) gCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCTGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCgg < 4:242830/149‑1 (MQ=255) ccAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa < 6:237590/149‑1 (MQ=255) cAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa > 6:1492/1‑148 (MQ=255) cAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGAc < 1:328328/149‑1 (MQ=255) ccGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACaaa < 8:280289/145‑1 (MQ=255) tGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAGTTTCGCCaggac > 2:212130/1‑119 (MQ=255) tGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAGTTTCGCCaggac < 1:212130/123‑5 (MQ=255) tGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑Gc > 2:75209/1‑149 (MQ=255) aTCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑Gca > 5:207733/1‑148 (MQ=255) gagaAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATc > 5:286707/1‑132 (MQ=255) gagaAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATc < 6:286707/132‑1 (MQ=255) gagaAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACaaa > 2:322030/1‑149 (MQ=255) gaAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAAt > 6:99822/1‑148 (MQ=255) aaaaTGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCa > 1:329244/1‑149 (MQ=255) aaTGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACTCAACTCGGACAAATCGACCTGGGTT‑GCACAAATCAcc < 1:254439/149‑1 (MQ=255) aaTGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCAcc < 7:162128/149‑1 (MQ=255) ctgcACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGca > 5:203243/1‑149 (MQ=255) ctgcACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGc < 5:99822/148‑1 (MQ=255) gcACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑Gca > 4:147217/1‑134 (MQ=255) gcACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑Gca < 3:147217/134‑1 (MQ=255) cACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACAt < 6:203243/149‑1 (MQ=255) cAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCAcc > 1:326047/1‑139 (MQ=255) cAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCAcc < 2:326047/139‑1 (MQ=255) cAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATc > 5:119845/1‑147 (MQ=255) aaCCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAg < 5:1492/149‑1 (MQ=255) aaCCACTCCAGACCATCCATGCATTCGCGCAACGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGCTCCTCCCGAAACTCCCCACGGGCACACAACTCGGACAAATAGACCTGGGTT‑TCACAAATCACCCGCACATcccg > 2:50472/1‑147 (MQ=255) aCCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAgg > 6:230989/1‑149 (MQ=255) cccTACAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTa < 8:125263/149‑1 (MQ=255) tCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa < 2:176932/104‑1 (MQ=255) tCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa > 1:176932/1‑104 (MQ=255) tCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGAc > 1:368595/1‑149 (MQ=255) cAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGAc < 2:164855/147‑1 (MQ=255) ccatccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTc < 6:207733/149‑1 (MQ=255) ccatccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTc < 5:230989/149‑1 (MQ=255) catccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCa < 6:119845/149‑1 (MQ=255) atccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGTACATCCAGGTAGACCTCTTCAt < 7:55545/149‑1 (MQ=255) atccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCACACATCCAGGTAGACCTCTTCAt < 1:322030/149‑1 (MQ=255) tccatGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGACCCGGAGATACAGGACCTGGCGAAACTCGCCACGCGCACACAACTCGCACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCGCTACATc > 7:269997/1‑149 (MQ=255) catGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGc < 7:13717/149‑1 (MQ=255) aTTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa > 3:350933/1‑88 (MQ=255) aTTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGa < 4:350933/88‑1 (MQ=255) gcgcAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAg > 1:284346/1‑123 (MQ=255) gcgcAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAg < 2:284346/123‑1 (MQ=255) gcgcAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTAccc < 2:329244/149‑1 (MQ=255) gcAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGa > 4:19914/1‑149 (MQ=255) aaaGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACg > 5:187008/1‑149 (MQ=255) aaGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACg > 4:74728/1‑148 (MQ=255) aGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACgg > 7:119497/1‑148 (MQ=255) tgCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTc > 7:15474/1‑149 (MQ=255) cAGAGACAGTACATTGAGCCGGTCATACAGGTCCTCGCTAAACTCGCCACGGTCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCAAATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCt < 8:332319/149‑1 (MQ=255) acattacattGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGa < 7:275726/149‑1 (MQ=255) tACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAgc > 5:255882/1‑149 (MQ=255) aGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCgcagca < 3:74728/148‑1 (MQ=255) aGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGcagcag > 6:344861/1‑149 (MQ=255) gCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCagcagc < 2:86584/149‑1 (MQ=255) ccGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCt > 4:245141/1‑149 (MQ=255) cGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCtt < 3:19914/149‑1 (MQ=255) gTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTTTGTT‑GCACAAATCACCCGCACATCCAGGTAGTCCTGTTCATCGCTACCTAGCCGACGGAAAGCAGCCGTCCTGCAGAAAGCGCAGCAGCttt < 1:50472/149‑1 (MQ=255) aTACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCt > 5:277893/1‑149 (MQ=255) aCAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTTAACACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACATg > 1:102579/1‑149 (MQ=255) cTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGcgcg > 3:275292/1‑149 (MQ=255) tGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGCGCgg > 7:135072/1‑149 (MQ=255) gCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGCGCgg < 8:119497/147‑1 (MQ=255) gAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGCGCGGGCt > 6:351810/1‑148 (MQ=255) | TGCCAGGCGCGGCATGGCGCAGCCAATCTGCCGACTGGCCTGATCGAGAAAATGCTGCACCAACCCCTCCAGACCATCCATGCATTCGCGCAAAGGCGGAATGTGCAGCGACAGTACATTGAGCCGGTGATACAGGTCCTGGCGAAACTCGCCACGGGCACACAACTCGGACAAATCGACCTGGGTT‑GCACAAATCACCCGCACATCCAGGTAGACCTCTTCATCGCTACCTACCCGACGG‑AAGCAGCCGTCCTGCAGAAAGCGCAGCAGCTTTACCTGCAAGCGCGGGCT > NC_002947/5100400‑5100690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |