| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,122,523 | T→C | 5.5% | Y76C (TAC→TGC) ‡ | PP_4508 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,122,523 | 0 | T | C | 5.5% | 221.3 / 2.1 | 73 | Y76C (TAC→TGC) ‡ | PP_4508 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (34/35); new base C (2/2); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
TGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGCCAGTTG > NC_002947/5122377‑5122665 | tGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCCGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTa < 1:114273/148‑1 (MQ=255) gCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAgc > 3:199398/1‑149 (MQ=255) cAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAgcg > 8:349812/1‑149 (MQ=255) cAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAgcg > 8:183677/1‑149 (MQ=255) aaGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTACCAGCGCa > 6:340371/1‑149 (MQ=255) gcCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTACCAGCGCATCat < 5:340371/149‑2 (MQ=255) ccAGCGCACAGGCCAGCGCCGCTTGGGCGCTGTGGCGGGTTGGCGGCAGGGGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGCACCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAg < 1:289893/149‑1 (MQ=255) ccAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGGTGCGCTACCAGCGCATCatc > 3:345215/1‑147 (MQ=255) ccAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGGTGCGCTACCAGCGCATCatc < 4:345215/149‑3 (MQ=255) ccAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAgg < 3:366655/149‑1 (MQ=255) ctggCCTGCGACGGTTGGGCGGTGTTCCGGGTTGGCGGCAGGTGGTCTCCGTGCACGGTCAGAATCAGGGATTAGGCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGaa < 4:199398/147‑1 (MQ=255) gCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGcc > 7:21907/1‑149 (MQ=255) gCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCg < 5:4360/149‑1 (MQ=255) aCGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGc > 3:174907/1‑148 (MQ=255) gCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCg > 3:316264/1‑135 (MQ=255) gCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCg < 4:316264/135‑1 (MQ=255) gCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAg < 6:194576/149‑1 (MQ=255) ttCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAggg > 2:252404/1‑149 (MQ=255) gcTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAg < 5:215659/120‑1 (MQ=255) gcTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAg > 6:215659/1‑120 (MQ=255) ttGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAAc < 5:298453/149‑1 (MQ=255) gcggcAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGCCATCAACGCa > 7:53855/1‑149 (MQ=255) gtCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGa < 4:360301/129‑1 (MQ=255) gtCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGa > 3:360301/1‑129 (MQ=255) gtCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCccacca > 8:318910/1‑149 (MQ=255) gCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACAt < 6:348663/149‑1 (MQ=255) cGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATgg < 7:349812/149‑1 (MQ=255) gTGCACGGTCAGAATCAGCGAATAGCCCTCCGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCATCGGCCAGGGTGCGGCTGGCCATCAACGCATAGCCCACCACATgc > 3:157797/1‑147 (MQ=255) cACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAac < 1:252404/148‑1 (MQ=255) aCGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAacga > 3:51201/1‑149 (MQ=255) aCGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTCAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAacga > 5:215214/1‑149 (MQ=255) ggTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAacgac > 2:207523/1‑148 (MQ=255) ggTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAacgac < 1:207523/148‑1 (MQ=255) tCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATc > 2:347894/1‑119 (MQ=255) tCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATc < 1:347894/119‑1 (MQ=255) aGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACAt < 2:354012/116‑1 (MQ=255) aGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACAt > 1:354012/1‑116 (MQ=255) aaTCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCggg > 7:181066/1‑148 (MQ=255) aaTCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCggg < 8:181066/148‑1 (MQ=255) cAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGa > 5:187333/1‑149 (MQ=255) aGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCggt < 6:215214/148‑2 (MQ=255) aGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGac < 6:171234/149‑1 (MQ=255) aGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGac < 7:183677/149‑1 (MQ=255) aGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGa < 5:2029/148‑1 (MQ=255) gCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTGGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGac > 5:159743/1‑148 (MQ=255) gCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGc > 6:123292/1‑144 (MQ=255) gCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGc < 5:123292/144‑1 (MQ=255) gCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGac > 7:355789/1‑148 (MQ=255) cGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGacca > 4:192387/1‑149 (MQ=255) tttcgtccTCGGC‑CCCGAGGGCGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGaccacc > 7:289180/7‑149 (MQ=255) aaTAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGaccacc > 8:294769/1‑149 (MQ=255) aaTAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGaccacc > 2:207396/1‑149 (MQ=255) cccTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGc < 4:174907/149‑1 (MQ=255) cccTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGc > 5:150674/1‑149 (MQ=255) gg‑gCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGCACGACGCCGGGCGGACCACCCGTGCCATGtt < 4:66345/149‑1 (MQ=255) cGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAgg < 8:355789/149‑1 (MQ=255) ggACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAAc > 7:192927/1‑92 (MQ=255) ggACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAAc < 8:192927/92‑1 (MQ=255) aCGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGAt > 4:181558/1‑149 (MQ=255) gAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTAGAAGCCCTAGGCCAGGGTGCGGCTGGACATAAACGCAAAGCCCACCACATGGAACCACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATgg > 2:140704/1‑149 (MQ=255) aaCTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGc < 7:318910/148‑1 (MQ=255) cGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCt < 3:18860/149‑1 (MQ=255) cGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCt < 8:289180/149‑1 (MQ=255) ggAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCt > 3:212271/1‑148 (MQ=255) gAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGa < 4:51201/149‑1 (MQ=255) gCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAg < 6:154905/126‑1 (MQ=255) gCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAg > 5:154905/1‑126 (MQ=255) gCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACa < 3:192387/149‑1 (MQ=255) tCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCCCCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCGTTGCCTGACAGCTc > 7:21760/1‑149 (MQ=255) gatgCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGc > 5:322914/1‑147 (MQ=255) atgCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGCCa < 8:21907/148‑1 (MQ=255) atgCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGCCAg < 6:187333/149‑1 (MQ=255) cgcTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGCTAGTTg < 7:294769/149‑1 (MQ=255) | TGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGG‑GCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCGCTCGAAGCCCTCGGCCAGGGTGCGGCTGGACATCAACGCATAGCCCACCACATGGAACGACGCCGGGCGGACCACCCGTGCCATGTTCAGGCCGATGGCCTCATTGCCTGACAGCTCCACCGCCAGTTG > NC_002947/5122377‑5122665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |