| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 390,088 | G→T | 7.6% | S121I (AGC→ATC) | soxA → | sarcosine oxidase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 390,088 | 0 | G | T | 7.6% | 226.2 / 6.6 | 77 | S121I (AGC→ATC) | soxA | sarcosine oxidase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (37/34); new base T (4/2); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
CTGCAGATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGG > NC_002947/389940‑390233 | cTGCAGATCGGCTCCAGCGAAGCTACCCAGATCACCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGgcag > 6:229494/1‑149 (MQ=255) gATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCatga > 1:3022/1‑149 (MQ=255) aTCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCatgat < 7:221243/149‑1 (MQ=255) tCGGCTCCAGCGAAGTTACCCAGATCCCCAACGTGCGCCCCACCCAACAGGCACTGTACGAGGGCGTTGTCGCCACCCGCCCCAACGGTGGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGTCAAGGTTGGCGGCAGCatgatg > 6:216756/1‑149 (MQ=255) tCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGAGGGCCTTGTCGCCACCAGCACCAACGCTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGCCGGCAGCatcatg > 5:111680/1‑149 (MQ=255) gCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgccg > 5:208260/1‑149 (MQ=255) cTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgccgc < 1:148752/149‑1 (MQ=255) cTCAAGCGAAGCTACGCAGATCACCAACGTTCTCGCCACCCAACAGGCACTGTACGCGGGCGTTGTCGACACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATgccgc < 8:239950/149‑1 (MQ=255) tCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgc > 8:8504/1‑148 (MQ=255) cAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgccaa < 7:8504/149‑3 (MQ=255) aGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgcc > 1:69310/1‑146 (MQ=255) aGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCATCATGCTgccgcc < 2:69310/146‑1 (MQ=255) gCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGc < 6:200156/149‑1 (MQ=255) gAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCtt > 2:318054/1‑149 (MQ=255) aCCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 4:273740/1‑149 (MQ=255) aCCCAGATCCCCAACGTGCGCGCCACCAAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 4:344684/1‑149 (MQ=255) cccAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTAGTCGCCACCAGCACCAACAGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTctacta > 6:179225/1‑148 (MQ=255) gATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACaaaa < 4:106611/149‑1 (MQ=255) tCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCTCCACCAGCACCATCGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAAcc < 6:331762/149‑1 (MQ=255) ccccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCt < 1:118021/149‑1 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCtt > 1:323956/1‑148 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 8:69625/149‑1 (MQ=255) ccAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 5:229494/149‑1 (MQ=255) ccACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCaaa < 2:2677/149‑1 (MQ=255) cccAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCg > 2:263472/1‑149 (MQ=255) aaaaGGCACTGTACGCGGGCCTTGTAGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGTCGGCAGCATGATTCAGCCGGGCTTCTACTACAAAACATTCATTTACCCCAAATCttta > 5:146760/4‑148 (MQ=255) aaCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTc < 5:9143/149‑1 (MQ=255) aaCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTc < 5:147183/149‑1 (MQ=255) aCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCt > 6:152151/1‑149 (MQ=255) aCAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCt < 3:89005/149‑1 (MQ=255) aGGCACTGTACGCGGGCCTTGTCGCCAGCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTgg < 6:111680/149‑1 (MQ=255) aGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTgg < 7:172371/149‑1 (MQ=255) ggCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGa > 5:237509/1‑149 (MQ=255) gCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 6:288274/126‑1 (MQ=255) gCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 5:288274/1‑126 (MQ=255) aCTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGa > 1:291193/1‑149 (MQ=255) cTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGAc > 5:268241/1‑149 (MQ=255) aCGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc < 1:93085/119‑1 (MQ=255) aCGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTc > 2:93085/1‑119 (MQ=255) cgcgGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTAc < 7:34167/148‑1 (MQ=255) gcgGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACga < 1:318054/149‑1 (MQ=255) gcgGGCCTTGTCGCCACCAGCACCAACGGTTCGCCGAACGACAACAACGACGTCATGGGAATCATCGGCAAGGTTCGCGGCAGCATCATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTAc > 8:18143/1‑147 (MQ=255) ggggCCTGGTCTCGACCAGCAACAACTGTTGGACGAACGTCAACAACGACGTCATGGGATTCCTCGGCAAGGTTGGCGGAAGCATGTTGCCGACGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACgag < 5:179225/148‑1 (MQ=255) gggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACATAACCTGCATGTACCCCAAATGGTTGTGGATGAGTTAGgag > 2:334985/1‑148 (MQ=255) ggCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGaa < 8:20551/149‑1 (MQ=255) ttGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTa > 4:195379/1‑148 (MQ=255) gTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACa < 3:273740/148‑1 (MQ=255) tCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCGAAATCGTTCTGGATGAGTTACGAGAAGTACAt < 2:323956/148‑1 (MQ=255) tCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATc > 4:246123/1‑149 (MQ=255) cGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATc < 5:152151/148‑1 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTc > 2:248403/1‑121 (MQ=255) caccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTc < 1:248403/121‑1 (MQ=255) ccaGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCGTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTaaa < 2:3022/149‑1 (MQ=255) cAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGccgccg > 1:243011/1‑149 (MQ=255) gCCTAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGc < 3:195379/148‑1 (MQ=255) ccGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACAt < 8:154725/125‑1 (MQ=255) ccGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACAt > 7:154725/1‑125 (MQ=255) cGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTTCATCCGTAAAGCCGCCGGCCTGGGCCGt > 8:130767/1‑149 (MQ=255) caCGTCAACAACGACGTCCTCGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGAACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc < 8:328402/148‑1 (MQ=255) gTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgcc > 2:316137/1‑149 (MQ=255) caacaaCGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGcgccgc > 6:28835/1‑149 (MQ=255) aacGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCGTCATGTACCCCAAATCGGTGTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTg > 4:119402/1‑147 (MQ=255) cgTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAAc > 6:207122/1‑148 (MQ=255) tCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTCCCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGACGCTGCAGAACGaa > 6:261950/1‑148 (MQ=255) tGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCt < 2:243011/149‑1 (MQ=255) tCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCT‑GGCCGTGCGCCGCTGCAGAACGATCCTGACAGc > 1:90004/1‑148 (MQ=255) ccTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGc > 5:310358/1‑148 (MQ=255) ctgggCATGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTgc < 3:191670/119‑1 (MQ=255) tCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTAc > 3:285895/1‑149 (MQ=255) cGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTAc > 3:193657/1‑148 (MQ=255) ggCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGa > 4:279812/1‑149 (MQ=255) aaGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATTACTTACGAGAAGTAAATCCGTAAAGCCGCCGGGCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTa < 5:216756/149‑1 (MQ=255) aGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGTATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTAc < 3:344684/149‑1 (MQ=255) ggtGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt < 6:208260/147‑1 (MQ=255) ttGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt > 5:359880/1‑148 (MQ=255) ccggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACAt > 7:71314/3‑148 (MQ=255) cggcggcATCATGCTGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATg > 4:308161/2‑148 (MQ=255) cggcAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAAcc > 8:350081/1‑149 (MQ=255) cagcaTGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCgg > 3:314960/1‑148 (MQ=255) | CTGCAGATCGGCTCCAGCGAAGCTACCCAGATCCCCAACGTGCGCGCCACCCAACAGGCACTGTACGCGGGCCTTGTCGCCACCAGCACCAACGGTTGGCCGAACGTCAACAACGACGTCATGGGCATCCTCGGCAAGGTTGGCGGCAGCATGATGCCGCCGGGCTTCTACTACAAAACCTTCATGTACCCCAAATCGTTCTGGATGACTTACGAGAAGTACATCCGTAAAGCCGCCGGCCTGGGCCGTGCGCCGCTGCAGAACGATCCTGACAGCTACGACTACATGAACCGG > NC_002947/389940‑390233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |