Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,293,717 A→C 9.4% C224G (TGC→GGC)  mmsA‑II ← methylmalonate‑semialdehyde dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,293,7170AC 9.4% 188.7 / 9.4 64C224G (TGC→GGC) mmsA‑IImethylmalonate‑semialdehyde dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (31/26);  new base C (3/3);  total (34/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

GGCATCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGCCGCAGACGATG  >  NC_002947/5293574‑5293865
                                                                                                                                               |                                                                                                                                                    
ggCATCAGGCAGCACCACCTGGTGGTTCTTGGCCCCCATCATTGACTGCACACGGTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATg                                                                                                                                                  <  5:120461/148‑1 (MQ=255)
ggCATCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATg                                                                                                                                                  <  2:139752/148‑1 (MQ=255)
  cATCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCa                                                                                                                                               >  3:253033/1‑149 (MQ=255)
   aTCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGCGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCAt                                                                                                                                              >  8:272236/1‑149 (MQ=255)
   aTCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCAt                                                                                                                                              <  3:258037/149‑1 (MQ=255)
    tCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATc                                                                                                                                             <  8:72011/149‑1 (MQ=255)
     cAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATc                                                                                                                                             >  8:274583/1‑148 (MQ=255)
       ggCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATccac                                                                                                                                          <  4:253033/149‑1 (MQ=255)
         cagcaCCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGATGCCATTTGCACccacca                                                                                                                                        <  4:243565/149‑1 (MQ=255)
           gcaCCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCGAGCTGGCTGCCGAGGTTGTAAACGAGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCaccacc                                                                                                                                      >  1:279242/1‑149 (MQ=255)
            caccacCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCt                                                                                                                                     >  4:242393/1‑149 (MQ=255)
             accaccGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGATGCCATTTGCACccacca                                                                                                                                        <  4:50694/145‑1 (MQ=255)
             accaccGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGATGCCATTTGCACccacca                                                                                                                                        >  3:50694/1‑145 (MQ=255)
                      tGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTgccgcc                                                                                                                           >  5:94497/1‑149 (MQ=255)
                                cccccATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACg                                                                                                                 <  7:272236/149‑1 (MQ=255)
                                  cccATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGtt                                                                                                               >  6:21831/1‑149 (MQ=255)
                                   ccATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTc                                                                                                              <  4:318918/149‑1 (MQ=255)
                                              tGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgccggc                                                                                                   >  5:168788/1‑149 (MQ=255)
                                              tGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgccggc                                                                                                   >  8:240707/1‑149 (MQ=255)
                                              tGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGAGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgccggc                                                                                                   >  4:326354/1‑149 (MQ=255)
                                                cacaCGCTTGCCATGCTGGCTGCCGATGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCGAATGGCATCCACCACCTGCTTgccgc                                                                                                                            <  2:35278/122‑1 (MQ=255)
                                                cacaCGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgccggccg                                                                                                 >  6:73795/1‑149 (MQ=255)
                                                  cacGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGCCTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGGTCAGCACGccggccgg                                                                                                >  8:283297/1‑148 (MQ=255)
                                                  cacGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGAGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGt                                                                                               <  2:279242/149‑1 (MQ=255)
                                                   acGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTa                                                                                              >  1:26755/1‑149 (MQ=255)
                                                     gCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACg                                                                                            >  8:43108/1‑149 (MQ=255)
                                                           cATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCtt                                                                                     >  5:87595/1‑149 (MQ=255)
                                                            aTGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATccac                                                                                                                                          >  4:149563/1‑96 (MQ=255)
                                                            aTGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATccac                                                                                                                                          <  3:149563/96‑1 (MQ=255)
                                                             tGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTc                                                                                    >  2:46584/1‑149 (MQ=255)
                                                               ctggctgCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGCCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTc                                                                                    >  1:3233/1‑147 (MQ=255)
                                                                   ctgCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAgcgc                                                                              <  5:73795/149‑1 (MQ=255)
                                                                             tGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACTACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGa                                                                      <  6:335820/147‑1 (MQ=255)
                                                                             tGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACTACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGa                                                                      >  5:335820/1‑147 (MQ=255)
                                                                              gTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCATATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGAc                                                                     >  4:34454/1‑147 (MQ=255)
                                                                              gTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCTGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGcc                                                                                          <  5:99787/126‑1 (MQ=255)
                                                                              gTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCTGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGcc                                                                                          >  6:99787/1‑126 (MQ=255)
                                                                              gTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGAcc                                                                    <  5:21831/148‑1 (MQ=255)
                                                                              gTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGAcc                                                                    <  7:297854/148‑1 (MQ=255)
                                                                                  aCGTGCGTACCGACTTCAGTAGAGCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGc                                                              <  6:87595/149‑1 (MQ=255)
                                                                                            cGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgcc                                                                                                      <  8:329207/100‑1 (MQ=255)
                                                                                            cGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACgcc                                                                                                      >  7:329207/1‑100 (MQ=255)
                                                                                             gACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACa                                                    <  7:274583/149‑1 (MQ=255)
                                                                                             gACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACa                                                    <  7:240707/149‑1 (MQ=255)
                                                                                                ttCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCg                                                 >  1:213672/1‑149 (MQ=255)
                                                                                                  cAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGccggccgg                                                                                                >  6:45215/1‑100 (MQ=255)
                                                                                                  cAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGccggccgg                                                                                                <  5:45215/100‑1 (MQ=255)
                                                                                                    gTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATc                                             <  3:242393/149‑1 (MQ=255)
                                                                                                       gagCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCa                                                             >  8:342835/1‑130 (MQ=255)
                                                                                                       gagCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCa                                                             <  7:342835/130‑1 (MQ=255)
                                                                                                       gagCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTg                                          <  2:26755/149‑1 (MQ=255)
                                                                                                           ccACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCg                                      >  2:251232/1‑149 (MQ=255)
                                                                                                               gAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATg                                  >  7:274731/1‑149 (MQ=255)
                                                                                                                   gAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGttt                              >  3:98392/1‑149 (MQ=255)
                                                                                                                   gAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGttt                              >  6:374411/1‑149 (MQ=255)
                                                                                                                     aaTCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGa                            <  1:46584/149‑1 (MQ=255)
                                                                                                                       tCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGc                          <  6:168788/149‑1 (MQ=255)
                                                                                                                           cTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACg                       >  3:102738/1‑148 (MQ=255)
                                                                                                                                 caggtggtggATGCCATTTGCACCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGgtgt                >  6:58516/5‑149 (MQ=39)
                                                                                                                                    cTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGc             <  2:3233/149‑1 (MQ=255)
                                                                                                                                    cTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGc             >  5:242953/1‑149 (MQ=255)
                                                                                                                                     tggtggATGCCATTTGCACCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCg                                                                       >  8:20209/1‑90 (MQ=25)
                                                                                                                                     tggtggATGCCATTTGCACCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCg                                                                       <  7:20209/90‑1 (MQ=38)
                                                                                                                                       gagggtgCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGcc            <  3:326354/145‑1 (MQ=255)
                                                                                                                                               aaaTGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGCCGCAGACGagg  <  4:98392/149‑3 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
GGCATCAGGCAGCACCACCGCGTGGTTCTTGGCCCCCATCATTGACTGCACACGCTTGCCATGCTGGCTGCCGAGGTTGTAAACGTGCGTACCGACTTCAGTAGAGCCCACGAAGGAAATCGCCTTGATGTCCTGGTGGGTGCAAATGGCATCCACCACCTGCTTGCCGCCGTGCACCACGTTCAGCACGCCGGCCGGTACGCCGGCTTCCAGCGCCAGCTCGACCAGAAGCATGGTCGACAGCGGATCCTGCTCGGATGGTTTGAGCACGAAGGTGTTGCCGCAGACGATG  >  NC_002947/5293574‑5293865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: