| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,300,288 | C→T | 6.1% | R1162Q (CGG→CAG) ‡ | recB ← | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,300,288 | 0 | C | T | 6.1% | 242.9 / 4.2 | 82 | R1162Q (CGG→CAG) ‡ | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| Reads supporting (aligned to +/- strand): ref base C (32/45); new base T (2/3); total (34/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
GCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGG > NC_002947/5300146‑5300426 | gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgc > 7:275161/1‑149 (MQ=255)gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgc > 1:230029/1‑149 (MQ=255)gCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgc < 2:201379/149‑1 (MQ=255) ccACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgcg > 2:320598/1‑149 (MQ=255) ccACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCcgcgcgcg > 8:158358/1‑149 (MQ=255) cGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCaa < 7:185045/149‑1 (MQ=255) aCAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTgg < 5:293110/149‑1 (MQ=255) aCAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTg < 7:192525/148‑1 (MQ=255) aGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCg < 2:209006/149‑1 (MQ=255) gcgcATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGCgg < 5:172812/149‑1 (MQ=255) gcgcATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCgg > 6:88379/1‑149 (MQ=255) gcATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTg > 2:4158/1‑149 (MQ=255) aTCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTg > 5:190981/1‑147 (MQ=255) cGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACAAGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAgg > 8:209560/1‑149 (MQ=255) cTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcag > 4:169422/1‑149 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGCggac < 5:232052/139‑3 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGTTGCGCGCGCGGCTGGCggac > 6:232052/1‑137 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCGGGGcagga > 4:207483/1‑145 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcagc < 8:275161/149‑1 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcag > 2:296643/1‑148 (MQ=255) tttCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCcag > 5:343881/1‑148 (MQ=255) aTCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTa < 7:323703/149‑1 (MQ=255) aGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACa < 8:79894/148‑1 (MQ=255) aGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAg < 4:242042/149‑1 (MQ=255) aGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAg > 8:86844/1‑149 (MQ=255) aGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAg > 1:286990/1‑149 (MQ=255) cgcACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCGGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTg < 6:201621/127‑1 (MQ=255) cTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGACGATGCTGATGTCACCGCGAAGGAAGATGAACAGTGATCCTCCAACATGGCGGTCATAATCGTAGTCAGCCAGCCGCGCTCTCCAATGGAGGTGCAGGGCCAGAAGTTACAGc > 2:251570/1‑148 (MQ=255) tCAGGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGc < 3:179184/147‑1 (MQ=255) tCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCACCACGTaaacca > 4:179184/1‑143 (MQ=255) tCACGCGGTGGCTTGGCGTGGTACACGCCGGGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGcac < 1:60711/149‑1 (MQ=255) aCGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGAGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGcac < 5:338999/147‑1 (MQ=255) ggTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATAc < 7:33731/147‑1 (MQ=255) ggTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATAc > 8:33731/1‑147 (MQ=255) gCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAgg > 1:312983/1‑149 (MQ=255) ttGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTc > 6:239044/1‑149 (MQ=255) cGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAg < 8:165597/149‑1 (MQ=255) cGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAg < 1:296643/149‑1 (MQ=255) gTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCgg < 6:159795/148‑1 (MQ=255) gTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGt < 3:169422/149‑1 (MQ=255) tACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTg < 5:88379/149‑1 (MQ=255) cacGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGt < 8:201292/146‑1 (MQ=255) cacGACGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCCGCCGCGCGCGCAACTGGCGGTGCAGGGCCCGCAGGTACAGCACATACTGCAGGTCGTAGCggggag > 7:201292/1‑145 (MQ=255) acGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGc < 6:79541/147‑1 (MQ=255) acGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGc > 5:79541/1‑147 (MQ=255) cGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCa < 3:325676/149‑1 (MQ=255) gCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTc > 5:182788/1‑147 (MQ=255) gCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCaa < 2:230029/149‑1 (MQ=255) gCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTTCAGGTCGTAGCGGTGCTCAAG‑AATc < 2:135337/148‑1 (MQ=255) gCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCa > 7:18008/1‑125 (MQ=255) gCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCa < 8:18008/125‑1 (MQ=255) ccGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGc > 1:320199/1‑149 (MQ=255) gctgctgGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCtttt > 1:57255/1‑149 (MQ=255) ctgctgGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCtttt < 2:339191/148‑1 (MQ=255) gCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTccatggc > 2:205579/1‑149 (MQ=255) aCCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACCTACGGCAGGGCGTAGCGGTGCTGAAG‑AATCGCCTTTTccatggcca > 4:100504/1‑149 (MQ=255) aCCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTccatggcca > 4:299478/1‑149 (MQ=255) cgcgCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTccatggccatg < 6:343881/149‑1 (MQ=255) gcgcAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTccatggccatgg < 7:209560/149‑1 (MQ=255) aGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAGTAATCGCCTTTTCCATGGCCATGGCAt < 1:4158/149‑1 (MQ=255) gAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATAATGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCg > 5:169388/1‑148 (MQ=255) aGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAg < 1:68580/149‑1 (MQ=255) aTGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCCCATACTGCAGGTAGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGGATCGTAGGc > 4:315571/1‑149 (MQ=255) tGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGcc < 6:182788/149‑1 (MQ=255) gAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGc > 7:162660/1‑147 (MQ=255) aaCAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGGACCGCACATACTGGAGGTCGTAGCGGTGCTGAAG‑ATTCGGCGTTTCCATGGCCATGGCCTCGTAGGCCTg > 2:314155/1‑149 (MQ=255) aCAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTgg < 5:239044/149‑1 (MQ=255) cAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCTCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGa < 7:158358/149‑1 (MQ=255) cAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGa < 1:320598/149‑1 (MQ=255) aGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGAt < 2:312983/149‑1 (MQ=255) gggCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCCGCCGGTACAGCACCTACTGGAGGGCGTAGCGGTGCTGGAG‑AAGGGACGGTTGCATGGCCATGGGCTGGTAGGCCgggtgg > 8:332150/1‑146 (MQ=255) cgccgcCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTcc < 2:286990/149‑1 (MQ=255) cgccgcCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTcc < 7:86844/149‑1 (MQ=255) ccgccAACATGGCGGGCATAATCGTAGTCCGCCAGCCTCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGc < 4:210040/149‑1 (MQ=255) cATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACccagc < 6:169388/149‑1 (MQ=255) aTGGCGGTCATAATCGTAGTCCGCCAGCCCCGCGCGCAACAGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTGAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTATGCCTGGATGTCCGCACccacc > 3:163237/1‑146 (MQ=255) ttgCGGTCATAATCGGATTCCGCCAGACGCGCTCGAAACTGGCTGTGAAGGGAAAGCAGGTACAGCACATACTGCAGGTCGTATCGTTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGTATGTCCTCACccagcca < 1:251570/147‑1 (MQ=255) ggTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTg < 2:57255/149‑1 (MQ=255) ggTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTg < 6:190981/149‑1 (MQ=255) ggTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTg > 6:183554/1‑149 (MQ=255) cATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGAc < 4:101054/149‑1 (MQ=255) aTAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGAc < 1:361325/148‑1 (MQ=255) aGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCg > 7:144523/1‑149 (MQ=255) gTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCgg < 3:100504/149‑1 (MQ=255) gTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCg < 2:320199/148‑1 (MQ=255) ccGCCAGTTGCGCGCGCGGCTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCC‑TTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACt > 2:303815/1‑137 (MQ=255) ccGCCAGTTGCGCGCGCGGCTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGAGCTCAAG‑AATCGCC‑TTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACt < 1:303815/137‑1 (MQ=255) | GCCACGGAACAGCGCATCGAGGCTTTCGATCAGCTCACGCGGTGGCTTGGCGTGGTACACGCCGTGGCCGCTGCTGCTGGCACCGCGCAGGAAGATGAACAGGGCGCCGCCAACATGGCGGTCATAATCGTAGTCCGCCAGCCGCGCGCGCAACTGGCGGTGCAGGGCCAGCAGGTACAGCACATACTGCAGGTCGTAGCGGTGCTCAAG‑AATCGCCTTTTCCATGGCCATGGCATCGTAGGCCTGGATGTCCGCACCCAGCCAGTTGGACTTGTAGTCGG > NC_002947/5300146‑5300426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |