| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 401,889 | C→T | 5.8% | intergenic (+416/+13) | PP_0334 → / ← PP_0335 | transposase/glutathione S‑transferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 401,889 | 0 | C | T | 5.8% | 207.0 / 2.1 | 69 | intergenic (+416/+13) | PP_0334/PP_0335 | transposase/glutathione S‑transferase family protein |
| Reads supporting (aligned to +/- strand): ref base C (31/34); new base T (2/2); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.05e-01 | |||||||||||
GAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCAC > NC_002947/401741‑402036 | gAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTAccc < 2:42469/149‑1 (MQ=255) cataGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAgggg < 8:91515/149‑1 (MQ=255) cataGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAggg < 1:148373/148‑1 (MQ=255) cataGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAggg < 2:327978/148‑1 (MQ=255) aGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGccc > 3:39996/1‑149 (MQ=255) aGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCAAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGTAGCGGGTTTACCCGCGAAGGGGCCCTCa < 4:244270/149‑1 (MQ=255) gCGGGCTTGCCCGCGAACACACATAATGGTGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAg < 4:145196/149‑1 (MQ=255) ccGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGgcg < 3:153495/149‑1 (MQ=255) aaCACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTa < 6:13446/149‑1 (MQ=255) acacaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGaa > 5:35416/1‑120 (MQ=255) acacaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGaa < 6:35416/120‑1 (MQ=255) acacaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGc > 1:20474/1‑148 (MQ=255) acacaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGc > 4:124181/1‑148 (MQ=255) cacaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGa < 4:320387/149‑1 (MQ=255) acaTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGAc > 8:164784/1‑149 (MQ=255) caTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGAcc < 8:140791/149‑1 (MQ=255) caTAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGAcc < 4:53354/149‑1 (MQ=255) tGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGa > 2:249823/1‑149 (MQ=255) gggTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGAt < 2:62316/148‑1 (MQ=255) tCAGGCACCGGCTTCGCCGGTTTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGTACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGc < 8:330399/149‑1 (MQ=255) gaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATg > 5:113228/4‑142 (MQ=255) gaacACCGGCGAAGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATg < 6:113228/139‑1 (MQ=255) gCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGa > 8:218783/1‑149 (MQ=255) gCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGa > 4:315018/1‑149 (MQ=255) cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGa‑c < 3:124181/149‑1 (MQ=255) ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCg > 3:18278/1‑149 (MQ=255) gCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCa > 7:79565/1‑149 (MQ=255) ccGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCa > 8:185235/1‑148 (MQ=255) cGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTc < 6:217022/143‑1 (MQ=255) cGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTc > 5:217022/1‑143 (MQ=255) ggTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATAc < 8:79565/149‑1 (MQ=255) gtTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGCCCATCGATGGCCGCTTGA‑CCACCTCGGCATACCAc > 2:141494/1‑149 (MQ=255) ggagcgGGCGTGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCAcg > 4:65491/4‑149 (MQ=255) cGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGc < 7:137105/149‑1 (MQ=255) gCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCt > 5:32388/1‑149 (MQ=255) tCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTgg > 3:75789/1‑149 (MQ=255) cccAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGgc > 4:279486/1‑149 (MQ=255) cccAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGgc > 8:190494/1‑149 (MQ=255) ccAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGgcg < 3:202463/149‑1 (MQ=255) cAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGACCCACCTCGGCATACCACGCCGCCAACCCAGGCTGgcg < 1:249823/149‑1 (MQ=255) aaaaGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCt > 8:54763/1‑149 (MQ=255) aaaaGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAAACCAGGCTGGCGCt > 1:286075/1‑149 (MQ=255) aGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCAc < 2:20474/149‑1 (MQ=255) ccacAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAggg < 1:163606/56‑1 (MQ=255) ccacAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAggg > 2:163606/1‑56 (MQ=255) ccacAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCTCTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACgccagc > 8:95198/1‑149 (MQ=255) acaGATAGCGAACACTGTGGAACACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGTGAGCgccagcct < 7:164784/149‑2 (MQ=255) caGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCaa < 3:279486/149‑1 (MQ=255) caGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCaa < 7:190494/149‑1 (MQ=255) gATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGTGAGCgccagcctggg < 7:185235/149‑5 (MQ=255) gCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCCAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCgg < 5:323008/149‑1 (MQ=255) cGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCTGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATTGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCggg > 5:30999/1‑149 (MQ=255) cGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCTGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATTGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCggg > 5:25542/1‑149 (MQ=255) cGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCggg < 6:294806/149‑1 (MQ=255) cGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCggg < 4:75789/149‑1 (MQ=255) cGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCggg > 4:96182/1‑149 (MQ=255) gAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCACCCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGc > 5:342619/1‑149 (MQ=255) tgGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGCCGCa > 7:7359/1‑148 (MQ=255) gAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGa‑c < 4:120211/81‑1 (MQ=255) gAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGa‑c > 3:120211/1‑81 (MQ=255) gAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCaaa < 6:32388/148‑1 (MQ=255) gAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAAt < 4:18278/149‑1 (MQ=255) gAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAAt > 5:376982/1‑149 (MQ=255) aaaCCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATc > 7:351512/1‑148 (MQ=255) ccTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGa < 1:238811/149‑1 (MQ=255) tAGGAGCGGGTTTACCTGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATTGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGcc < 6:30999/149‑1 (MQ=255) tAGGAGCGGGTTTACCTGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATTGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGcc < 6:25542/149‑1 (MQ=255) ttACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCTGGCTGACGCACATCCAGATAGCCCAGCGCACAgg > 3:295458/1‑149 (MQ=255) tACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAgg < 3:65491/148‑1 (MQ=255) aCCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGcc > 8:252934/1‑149 (MQ=255) ccGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CAACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCAc > 6:344039/1‑149 (MQ=255) ccGCGAAGCGGCCCTCAGGCCACTGCCGCTGTAGCGACCATCGATGGCCGCATGA‑CCACCTCGGCATACCACGCCGCAAACCCAGGCTAGCGCTCCCGCCAGCAAAACCCGCGCTCACGCAAATCCAGATAGCCAAGCGCACAGGCCAc > 4:60769/1‑149 (MQ=255) | GAGTCCATACATAGGAGCGGGCTTGCCCGCGAACACACATAATGGGGTGTCAGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCAAAAGCCCACCACAGATAGCGAACACTGTGGAAAACCTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCCTCAGGCCACTGGCGCTGTAGCGACCATCGATGGCCGCTTGA‑CCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCAC > NC_002947/401741‑402036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |