| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,446,203 | T→G | 6.0% | A116A (GCT→GCG) | thiE → | thiamine‑phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,446,203 | 0 | T | G | 6.0% | 229.8 / 4.0 | 80 | A116A (GCT→GCG) | thiE | thiamine‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base T (32/43); new base G (3/2); total (35/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
TGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCAC > NC_002947/5446059‑5446346 | tGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCa < 8:67021/149‑1 (MQ=255) gACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAg > 2:171100/1‑149 (MQ=255) aCGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAg < 1:171100/148‑1 (MQ=255) aCGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGc > 6:289390/1‑149 (MQ=255) cGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCg < 7:269182/149‑1 (MQ=255) gCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCCCTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCg > 7:250660/1‑148 (MQ=255) ccGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGaa < 5:159301/149‑1 (MQ=255) gAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAgg < 8:316575/149‑1 (MQ=255) gAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCAGCCTGGGCGGCCAgttcgag < 4:350408/149‑7 (MQ=255) cTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGgcgc > 8:208053/1‑149 (MQ=255) gccgccCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCa < 5:228595/148‑1 (MQ=255) cccgccTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTAc < 5:324719/149‑1 (MQ=255) ccgccTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCCAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACg > 6:17472/1‑149 (MQ=255) gccTCGCTGTCGCCGTGCACCTCGCCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTCCTCGGCCCTAAGGCAATCATCGGCTCCACCTGCCACGCCCGCCTCGAAATCGCCGCCCAGGCTGCCACCGAACGCGCCAGCTACgag > 8:114059/1‑147 (MQ=255) gtgtCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt < 6:293287/149‑1 (MQ=255) gtgtCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt < 5:258588/149‑1 (MQ=255) ggCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCg > 2:225854/1‑149 (MQ=255) gCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttct > 2:47434/1‑149 (MQ=255) gCACCTGGGCCAGACCGACGGCCCGCTGACCCCCGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttct < 8:129929/149‑1 (MQ=255) cTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCaa > 2:197013/1‑149 (MQ=255) cTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCaa < 8:290856/149‑1 (MQ=255) gggCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAAtt < 8:256722/149‑1 (MQ=255) ccAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTg < 4:203942/149‑1 (MQ=255) cAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt > 3:24928/1‑129 (MQ=255) cAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt < 4:24928/129‑1 (MQ=255) aGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTc < 7:114059/149‑1 (MQ=255) gACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCa > 6:87281/1‑149 (MQ=255) cGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttct > 1:140663/1‑134 (MQ=255) cGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttct < 2:140663/134‑1 (MQ=255) cGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGc < 5:289390/149‑1 (MQ=255) ggCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGcc > 6:33124/1‑149 (MQ=255) gCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCg > 5:327310/1‑149 (MQ=255) cccGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCgg < 1:225854/149‑1 (MQ=255) cGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGgc < 7:208053/149‑1 (MQ=255) cGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGgc < 3:270667/149‑1 (MQ=255) cGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGgc > 4:89509/1‑149 (MQ=255) ccccGGCCCGCACACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGccc < 7:190214/149‑1 (MQ=255) ggCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTg < 5:87281/149‑1 (MQ=255) gCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGc < 3:89509/149‑1 (MQ=255) ccGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCACGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATACTGTCACCAACCCGGGCGCGCCCGCTGcc > 8:1483/1‑148 (MQ=255) gcACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCACCGt > 2:329363/1‑149 (MQ=255) aCTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCg < 5:71791/149‑1 (MQ=255) tGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGc > 3:52555/1‑149 (MQ=255) cTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGccg > 5:211257/1‑148 (MQ=255) cTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGc < 6:327310/147‑1 (MQ=255) cTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTAACCAAGCCGGGCGCGCACGCTGCCAACGTCGGCCt > 4:294333/1‑149 (MQ=255) ggCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt < 5:77642/90‑1 (MQ=255) ggCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCttt > 6:77642/1‑90 (MQ=255) gTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAg < 4:52555/149‑1 (MQ=255) atcatcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCcg < 3:208306/149‑1 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttctt < 4:7814/86‑1 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGcttctt > 3:7814/1‑86 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCaa < 2:67961/122‑1 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCaa > 1:67961/1‑122 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGccgacg < 5:17472/148‑5 (MQ=255) atcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCAGCGCGAGCACGCCCgcgc > 3:327487/1‑149 (MQ=255) tcGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGcc > 7:272181/1‑149 (MQ=255) ggCTCCACCTGCCCCGCCAGCCTCGAACTGGCCGCCCCGGCTGCAAGCGAAGGCGCGAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCCAGCGGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGccc < 4:93426/148‑1 (MQ=255) gCTCCACCTGCCACGCCAGCGTCGAACTGGCCGCCCTGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTGTGTCACCTAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAg < 7:1483/149‑1 (MQ=255) ccgccACGTGCCACGCCCGCCTCCACCTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAg < 2:310139/146‑1 (MQ=255) cACCTGCCACGCCAGCCTCGAACTGGCTGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGGCGGCCTGCTCGAGCAGGCCCGCGCCCAGGt < 5:272866/147‑1 (MQ=255) cACCTGCCACGCCAGCCTCGAACGGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGt < 6:138918/147‑1 (MQ=255) aCCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGaa < 8:272181/149‑1 (MQ=255) aCCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCGGACAACGTCCGCCTGCTCGAGCAGGCCCGCGCCCAGGGGa > 8:311590/1‑148 (MQ=255) gCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGGTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCGGCCAACGTCGGCCGGGGGGCGCGGGCCCCCGCCCCGGGGaagcgg > 1:200723/1‑145 (MQ=255) ccACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGc < 1:47434/149‑1 (MQ=255) cTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCGGCTCGAGCCGGCCCGCGCCCCGGTGAAACAGCCGATCGCCGt > 5:323924/1‑149 (MQ=255) cttcgcTGGCAGCCTGGGCGGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCGCGCGCCGGCCCGCGCCCAGGTGGAACTGCCGATCGCCgg > 7:289926/6‑147 (MQ=255) ttcgcTGGCAGCCTGGGCGGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGCGCATGGCCGCGCCCAGGTGAAACTTCCGATCGCCGTGa > 7:258114/5‑149 (MQ=255) cGAACTGGCCGCCCAGGCTGCCTGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGGCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGa < 2:249594/149‑1 (MQ=255) aaCTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTg < 3:206275/128‑1 (MQ=255) aaCTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTg > 4:206275/1‑128 (MQ=255) aCTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCACGCCGGGCGCGCCCGCTGCCAACGGCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCg < 5:33124/149‑1 (MQ=255) cTGGCAGCCTGGGCGGCCAGCGAAGGAGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCgg > 7:12575/1‑149 (MQ=255) ggCCGCCCAGGCGGCCCCCGAAGGCGCCCGGTTCGGGGGCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTg < 2:200723/149‑1 (MQ=255) gcggccCTGGGTGCCAGCGATGGCGCAAGCTAGGTGGCCTTTGGCCGCTTTTTAAATTTTGTCACCATGCGGGGCGCGCCGGCTGCCAACGTCGGCGTGCTCTAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTg < 4:327487/145‑1 (MQ=255) gccgccCAGGCTGCCAGGGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGCGCAGGCCCCCGCCCAGGTGATACTGCCGATCGCCGTGATCCGTgg > 3:229849/1‑149 (MQ=255) gccgccCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGCGCAGGCCCGCGCCCCGGGGAAACAGCCGATCGCCGTGATCGGTgg > 1:188780/1‑149 (MQ=255) cccAGGCTCCCCGCTACGGCCCCTGCTAGGGGGCTTTGGCCCGCTTATCCAATGCTCCCACCCCCCGGGGCGCCCCCGCGCCCACCGGGGCCGGGCCCCCGCCGCCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATc < 2:188780/149‑1 (MQ=255) cAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCGGCTCGCGCAGGCCCCCCCCCAGGGGCAACTGCCCATCGCCCGGATCGGTGGCAtacc > 5:337532/1‑146 (MQ=255) | TGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCAC > NC_002947/5446059‑5446346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |