| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 407,756 | G→C | 5.4% | A83A (GCC→GCG) | aceF ← | AceF‑S‑acetyldihydrolipoate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 407,756 | 0 | G | C | 5.4% | 340.4 / 5.2 | 104 | A83A (GCC→GCG) | aceF | AceF‑S‑acetyldihydrolipoate |
| Reads supporting (aligned to +/- strand): ref base G (43/55); new base C (3/3); total (46/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAG > NC_002947/407608‑407902 | tCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCGGCAGCCGGGGCTGCGGCCGGAGCAGCAGGGGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg‑gg > 3:160045/1‑149 (MQ=255)tCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg‑gg > 6:28963/1‑149 (MQ=255)tCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg‑gg > 6:124178/1‑149 (MQ=255) cTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg‑ggg > 2:203312/1‑149 (MQ=255) cTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAg‑ggg > 7:144237/1‑149 (MQ=255) cTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCAGCGCCTCAg‑ggg > 2:83846/1‑149 (MQ=255) ggCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGc < 8:141283/147‑1 (MQ=255) gCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCgc < 7:112980/149‑1 (MQ=255) ccTTGCCCGACGAACCGATGTCGAGAAGGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGATTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCCCCTGAG‑GCGCCggc > 7:57792/1‑147 (MQ=255) cTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCgcag > 2:359792/1‑149 (MQ=255) cTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCCCCTGAG‑GCGCCggct < 8:57792/149‑4 (MQ=255) cTTGCCCGACGAACCGATGTCCGGCACGAGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCgcag > 1:211568/1‑149 (MQ=255) gCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCAGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGcagcag > 4:24521/1‑149 (MQ=255) ccGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcg < 2:25605/149‑1 (MQ=255) cgacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGATTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcgg > 8:239062/1‑149 (MQ=255) gacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcggc < 4:106542/149‑1 (MQ=255) gacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcggc < 5:81262/149‑1 (MQ=255) gacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcggc < 1:157304/149‑1 (MQ=255) gaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGcc < 1:315139/149‑1 (MQ=255) gaACCGATGTCCGGCACGTGGATGTCCTGAACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GCGCCGCTGCTGCGGcccc > 5:30153/1‑149 (MQ=255) aCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCt > 2:101672/1‑149 (MQ=255) aCCGATGTCCGGCACGTGGATGTACTGCAAGCTGGAAGCAGCCGGGGCTGAGGCCGGAGCAGCAGGAGCGGCTTCAGAGGCTGTCGCTGGCGCCGCAGACGGAGCACCGGCAGCAGCCGGCGCCTCAG‑GGGCCGAAGCAGATGCGCCCt > 3:167583/1‑149 (MQ=255) ccGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GCGCCGCTGCTGCGGcccctga < 2:24461/149‑4 (MQ=255) cGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCg < 5:11173/149‑1 (MQ=255) cGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCg > 1:120188/1‑149 (MQ=255) tGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCt < 5:124178/149‑1 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCGGCAGCCGGGGCTGCGGCCGGAGCAGCAGGGGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTc < 4:160045/149‑1 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGTGGGCCGCAGCAGCGGCGCCCTCGGCt < 1:193602/148‑1 (MQ=255) cGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTc > 8:330018/1‑147 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAgcggc < 6:100810/134‑1 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAg < 3:227221/149‑1 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCAGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAg < 1:83846/149‑1 (MQ=255) gCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAgg > 8:84066/1‑149 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCa > 7:143775/1‑143 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACca < 2:112444/149‑1 (MQ=255) tGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGt > 3:67921/1‑149 (MQ=255) gTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGtt > 7:276319/1‑149 (MQ=255) gTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGtt > 3:82535/1‑149 (MQ=255) ccTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcg > 7:74839/1‑149 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCCGGACCAGCAGTtcgt > 3:186303/1‑149 (MQ=255) cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgt > 8:53190/1‑149 (MQ=255) gCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCctt > 4:8907/1‑149 (MQ=255) tGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttct > 5:141154/1‑149 (MQ=255) cagcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAgg < 4:340894/149‑1 (MQ=255) gcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg > 7:19034/1‑149 (MQ=255) cGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGt < 5:28963/149‑1 (MQ=255) gggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCg > 3:191089/1‑149 (MQ=255) cGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGc < 4:370967/149‑1 (MQ=255) ggCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCgca < 3:336092/85‑1 (MQ=255) ggCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCgca > 4:336092/1‑85 (MQ=255) ccGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCtt > 2:318949/1‑148 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAc < 3:111383/149‑1 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAcc > 1:220845/1‑149 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAcc < 2:233346/149‑1 (MQ=255) gcagcaGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCtt < 2:211568/149‑1 (MQ=255) gcagcaGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCtt < 7:220125/149‑1 (MQ=255) agcagGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGTTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCa < 1:101672/149‑1 (MQ=255) cagGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGt < 7:144204/149‑1 (MQ=255) agGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGtt < 7:53190/149‑1 (MQ=255) ggAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTc < 7:84066/149‑1 (MQ=255) gAGCGGGTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTcc < 7:239062/149‑1 (MQ=255) gCGGCTTCAGCGGATGGCGCTCGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGCCGCCTCAG‑GCGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCCCCCAGCTTCACCTTCAGTTccat > 4:325256/1‑147 (MQ=255) cggcgccAGCGCCAGCCGCTGAAGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt > 5:13156/7‑148 (MQ=255) ggCTTCAGCGGCTGGCGCTGGCGCCGCAGCCTGAGCAGCGGCAGCAGCCGTCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGa < 3:24521/149‑1 (MQ=255) ggCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGa < 1:359792/149‑1 (MQ=255) cTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGAt > 3:274933/1‑148 (MQ=255) ttCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTTGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCa > 7:185026/1‑149 (MQ=255) ttCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCa > 4:267257/1‑149 (MQ=255) aGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCTGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGc < 6:141154/149‑1 (MQ=255) gctggcgctggcGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTTGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGc > 2:306966/1‑149 (MQ=255) gcgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCAGCAGCAGCGGCGCCCTCGGCTTACAGGACCAGCAGTTCGTCGCCTTCTTTCGGGCGGTCGCCCAGCATGACCTTCAGTTCCTTGATCACGCCAGCCTTg > 8:250391/1‑149 (MQ=255) cgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTgg < 8:268203/149‑1 (MQ=255) cgctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTgg < 2:120188/149‑1 (MQ=255) ctggcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGgc > 4:131259/1‑149 (MQ=255) gcgcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGcc < 7:330018/149‑1 (MQ=255) cgccgcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCg < 8:74839/149‑1 (MQ=255) cgccgcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCg < 4:191089/149‑1 (MQ=255) ccgcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCgg > 8:137523/1‑148 (MQ=255) gcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAt < 4:186303/149‑1 (MQ=255) aGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAttt < 3:131259/149‑1 (MQ=255) gCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTc > 6:280031/1‑149 (MQ=255) cGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCa < 3:8907/149‑1 (MQ=255) ggAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCAt > 1:240555/1‑149 (MQ=255) cagcGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 7:137523/149‑1 (MQ=255) cagcGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 7:342698/149‑1 (MQ=255) cagcGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAg < 8:144237/149‑1 (MQ=255) ggCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCt > 6:230263/1‑149 (MQ=255) agcagcCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGt > 2:253204/1‑149 (MQ=255) cagcCGGCGCCTCAG‑GGGCCGGAGCAGCGGCGCCCTCGGCTTCGAGGACCAGCATTTCGTAGCCTGCTTTCAGGCGATCGCCCAGCTTGACCTTCACTTCCCTGATCTCGCCAGCCTTGTTCGCCGTAATTTCCATGGAGGCCTTGTCg < 4:167583/149‑1 (MQ=255) agcCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCg < 3:325256/148‑1 (MQ=255) ccGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGAc < 2:220845/149‑1 (MQ=255) ccGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGAc < 5:280031/149‑1 (MQ=255) cgcCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCa < 1:253204/149‑1 (MQ=255) ccgcAG‑GGGCCGCCGCAGCGGCGCCCGCGGCTTCCAGGACCAGCAGTTCGGCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAgg < 4:204008/146‑1 (MQ=255) tCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCa > 6:182672/1‑145 (MQ=255) tCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCa < 5:182672/145‑1 (MQ=255) tCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 6:149117/1‑149 (MQ=255) tCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGATCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 1:248770/1‑149 (MQ=255) aG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 4:29317/1‑147 (MQ=255) g‑gggCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTcag > 5:232699/1‑149 (MQ=255) | TCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAG‑GGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAG > NC_002947/407608‑407902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |