| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,513,987 | C→A | 9.8% | Y204* (TAC→TAA) ‡ | urtE → | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,513,987 | 0 | C | A | 9.8% | 227.0 / 14.3 | 82 | Y204* (TAC→TAA) ‡ | urtE | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (41/33); new base A (5/3); total (46/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.87e-01 | |||||||||||
TGATTCTCGACGAGCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGATGCCCTGCAC > NC_002947/5513839‑5514135 | tgATTCTCGACGAGCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTAc < 7:304942/149‑1 (MQ=255) aTTCTCGACGAGCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCt > 2:98167/1‑149 (MQ=255) tcGACGAGCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGt > 2:236745/1‑148 (MQ=255) gCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGGTACTGGTCagccagc < 4:334423/149‑7 (MQ=255) gaccgaAGGCATCCTGCCCTCGGTGATCTAGGAAATCGGCGCGGTGATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTAGGACTTTGCCGAGGCGCTGGCTGACCTGTACCTGGTCATGGCCCGTg < 6:299168/149‑1 (MQ=255) accgaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGGTACTGGTCag > 4:289595/1‑139 (MQ=255) accgaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGGTACTGGTCag < 3:289595/140‑2 (MQ=255) cgaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGc > 8:187750/1‑148 (MQ=255) cgaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGc > 6:366548/1‑148 (MQ=255) gaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTgg < 8:294030/146‑1 (MQ=255) gaAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTgg > 7:294030/1‑146 (MQ=255) aaGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGa > 1:140716/1‑148 (MQ=255) aGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGaaa > 2:233890/1‑149 (MQ=255) tCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCCTCCAGCGCgg > 7:269680/1‑149 (MQ=255) ggTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGGTACTGGTCagccag > 6:104625/1‑119 (MQ=255) tCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCgcgg < 2:140716/148‑1 (MQ=255) aGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGc < 6:19689/122‑1 (MQ=255) aGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGa > 1:276170/1‑148 (MQ=255) aGGAAATCGGCGCGGTCATCCGCCGCCTGACCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGa > 3:172989/1‑148 (MQ=255) ggAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGaaa > 7:318064/1‑149 (MQ=255) aTCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACAt < 4:213817/149‑1 (MQ=255) tCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATg > 5:34588/1‑149 (MQ=255) gcgcGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTAcc < 3:256677/96‑1 (MQ=255) gcgcGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTAcc > 4:256677/1‑96 (MQ=255) gcgcGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTAcc > 2:321699/1‑96 (MQ=255) gcgcGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTAcc < 1:321699/96‑1 (MQ=255) gcgcGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGAACCTCGTCATGGCCCGTGGCGAAATCATCCAGCGCGGACGCGGCGAAAACaaccat > 8:165615/1‑144 (MQ=255) gcgGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGc < 7:187750/149‑1 (MQ=255) tCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGaa < 4:330735/149‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGc > 2:186372/1‑139 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGc < 1:186372/139‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAgg < 2:276170/149‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAg < 6:34588/148‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAg < 1:98167/148‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAg < 5:197765/148‑1 (MQ=255) aTCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCAT‑GCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGgt < 5:142983/149‑1 (MQ=255) tCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGgt < 4:100644/149‑1 (MQ=255) tCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGgt < 4:76317/149‑1 (MQ=255) ccgccgCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGgtg > 5:319942/1‑149 (MQ=255) cgccgcCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGgtg > 4:314906/1‑148 (MQ=255) ccgccTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTAc > 8:58794/1‑149 (MQ=255) cGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTgg < 3:331741/149‑1 (MQ=255) tGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCa < 2:159060/149‑1 (MQ=255) cGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCAtt > 2:121775/1‑148 (MQ=255) aCATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGGCCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTaa > 3:221536/1‑149 (MQ=255) tGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCt > 8:273840/1‑149 (MQ=255) gATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGa < 5:366548/149‑1 (MQ=255) gATTTTGCTGGTGGAGCAGTTCTACGACTTTGACGAGTCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGACGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGc > 1:38747/1‑147 (MQ=255) aTTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAg > 7:282956/1‑149 (MQ=255) ggtggAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGAGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACAATTTAATCTGAGAGCAAGGAcc > 8:354961/1‑149 (MQ=255) gtggAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACGCCGGGCTGGTAACCATTTAATCTGCGAGCAACGAc < 1:233890/148‑1 (MQ=255) gCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCg < 5:58971/148‑1 (MQ=255) gCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCg > 6:58971/1‑148 (MQ=255) aGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCgaga < 3:314906/149‑1 (MQ=255) ttCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACg > 8:310708/1‑149 (MQ=255) cTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAg > 1:305368/1‑95 (MQ=255) cTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAg < 2:305368/95‑1 (MQ=255) tACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCtt < 5:186073/138‑1 (MQ=255) tACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCtt > 6:186073/1‑138 (MQ=255) tACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTg > 7:292431/1‑149 (MQ=255) tACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTg > 8:164581/1‑149 (MQ=255) aCGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCACGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGt > 2:303564/1‑149 (MQ=255) aCGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGt > 5:231414/1‑149 (MQ=255) aCGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGt > 7:331663/1‑149 (MQ=255) cGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTg < 1:236745/147‑1 (MQ=255) cGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTc < 6:319942/149‑1 (MQ=255) gACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCa > 3:345812/1‑149 (MQ=255) aCTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCAt < 4:172989/149‑1 (MQ=255) tttGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACAATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCAt > 7:91092/1‑147 (MQ=255) tttGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACAATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCAt > 5:250345/1‑147 (MQ=255) gCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCg > 1:171896/1‑117 (MQ=255) gCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCg < 2:171896/117‑1 (MQ=255) cGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTAc > 2:310586/1‑149 (MQ=255) gAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACg < 7:58794/149‑1 (MQ=255) gctggctgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACg > 5:240915/1‑129 (MQ=255) gctggctgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACg < 6:240915/129‑1 (MQ=255) ctggctgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTc < 6:231414/149‑1 (MQ=255) ctggctgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTc < 7:273840/149‑1 (MQ=255) ccatgACCAGGTACTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTaa < 3:184081/89‑1 (MQ=255) ccatgACCAGGTACTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTaa > 4:184081/4‑92 (MQ=255) ccatgACCAGGTACTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGGCCTTGCGAGACGCTGTCATTCGCTACGAAATTcgc > 7:129094/4‑149 (MQ=255) ccatgACCAGGTACTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTcgc > 4:191330/4‑149 (MQ=255) catgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGTAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTcgcg > 3:248256/3‑149 (MQ=255) catgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGCCCTTGCGAGACGCTGTCATGAGCTACGAAATTcgc > 3:253067/3‑148 (MQ=255) ctgACCCGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAACACATGCAAGCCGAAGGGGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGa < 8:318064/149‑1 (MQ=255) tgACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGAt > 7:68843/1‑149 (MQ=255) aCCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGATg < 1:310586/148‑1 (MQ=255) ccTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGATGCCCTGca > 6:291622/1‑148 (MQ=255) ccTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGGCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGATGCCCTGcac < 4:219615/149‑1 (MQ=255) | TGATTCTCGACGAGCCGACCGAAGGCATCCAGCCCTCGGTGATCAAGGAAATCGGCGCGGTCATCCGCCGCCTGGCCGAGCGTGGCGACATGGCGATTTTGCTGGTGGAGCAGTTCTACGACTTTGCCGAGGCGCTGGCTGACCAGTACCTGGTCATGGCCCGTGGCGAAATCATCCAGCGCGGTCGCGGCGAAAACATGCAAGCCGAAGGTGTACG‑CGGGCTGGTAACCATTTAATCTGCGAGCAACGACCTTGCGAGACGCTGTCATGAGCTACGAAATTCGCGATGCCCTGCAC > NC_002947/5513839‑5514135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |