| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,518,736 | T→A | 5.2% | K59* (AAA→TAA) ‡ | PP_4851 ← | phosphate starvation‑inducible protein PsiF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,518,736 | 0 | T | A | 5.2% | 230.6 / 2.4 | 77 | K59* (AAA→TAA) ‡ | PP_4851 | phosphate starvation‑inducible protein PsiF |
| Reads supporting (aligned to +/- strand): ref base T (36/37); new base A (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.82e-01 | |||||||||||
GGTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTG > NC_002947/5518588‑5518883 | ggTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCttt < 7:197263/149‑1 (MQ=255) gcATTTCTTCTTCAGGGAATCGCTCATGAAGGCCTTGCGCTGATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTCGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCttt < 1:274651/147‑1 (MQ=255) aTTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt < 5:113828/149‑1 (MQ=255) aTTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt < 4:278893/149‑1 (MQ=255) tttCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGTCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt > 1:70320/1‑148 (MQ=255) tcttcttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTc < 2:5977/148‑1 (MQ=255) cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAt < 8:348427/146‑1 (MQ=255) cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAt < 2:199578/146‑1 (MQ=255) ttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGcc > 7:24459/1‑149 (MQ=255) cAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGcc < 5:85338/147‑1 (MQ=255) aGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGATCATGAACGCTTTGCGTTCATCGCCCtt > 7:4345/1‑149 (MQ=255) aGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTATTCATGTTTTCAT‑GCAGGGTTTAAGCGAGATCCTTTTTGAGAGAGGTTCTCATTAACGCTTTTAGTACATCgacg > 8:39497/1‑144 (MQ=255) ggCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTAATTATTTATT‑GCTGGGTTTGGGGCAAATCATTTTTCAGGCATGTGCTAATGAACGGTTTGCGTTCATCgaacat > 6:177381/1‑143 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTCATTTTTTCTT‑GCTGGGTTTGGGGTACATCCTTTTGCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAgg > 2:130491/1‑149 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAgg < 8:24459/149‑1 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAgg < 7:40460/149‑1 (MQ=255) aaTCGCTCATGAAGGCCTTGCGCTCATCCCCCTACAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCATTTACAGGCAGGTGAACATCACCGCGTTGCGGTCATCGCCCATGAgg > 6:329134/1‑149 (MQ=255) gCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCt > 5:177312/1‑149 (MQ=255) cATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTgg > 1:75472/1‑149 (MQ=255) aTGAAGGCCTTGCGCTCATCCCCCATCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTg < 8:124632/147‑1 (MQ=255) tGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCg < 2:75472/149‑1 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTGGAGGCGCATCGTATTTAAGGCCGGTGATCATGAACGCTTTGGGGTCATCGCCCTTTAGCGCCATGGCgg > 5:383102/1‑149 (MQ=255) aGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTg < 3:208062/149‑1 (MQ=255) gcgcgcATCCCCCTTCATGGCTTTGGTGGTGTCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTc < 6:54944/147‑1 (MQ=255) cTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTATTCATTTTTTCTT‑GCTGCGATTGTGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCATTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCAGCGt > 3:291619/1‑149 (MQ=255) attccccTTCAGGTCTTTGTTGGTTTCGTCAGCTTTTGAGTTCATCATTTTTTCTT‑GCTTTGTTTGTGGCAATTTCTTTTTCAGGCATTTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGtt < 6:277185/144‑1 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTCATTTTTTCTT‑GCTGGGGTTGGGGCCCATCGTTTTTCAGGCAGGTGCTCATGAACGCTGTGCGTGCATCGCCGTTGAGGGCGTTGGCGGTGGGGTCGGCggggc > 6:337315/1‑145 (MQ=255) aTCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTCATTTTTTCAT‑GCTGGGGGTTAGTGACATCCATTTAAAGGCAGATGCTCATCAACGCGTTTCGTTAATCGCGCTTGAGGGAATTGGAGGTGGCGTAGGGGTTg > 2:224424/1‑148 (MQ=255) cccccTTCAGGGCTTTGGTGGTCGCGTCAGCATTGCAGGTATTCATTTTTTCTT‑GCTGGGTTTTGGGCACATCCTTTTTCAGGCAGGTGCTCATGAAAGCTTTGAGTTCATCTCCCTTGAGGGGCTTGGGGGTGGCGTCGGCGTTGCAg > 7:234668/1‑149 (MQ=255) ccccTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTGTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTAAGGCAGGTGCTCATTAACGATTTGGGTTCCTCGCCCTTGAGGGGCTTGGAGGTTGCGGCGGGGTGGGAgg > 6:270589/1‑149 (MQ=255) cTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGttt < 5:177381/149‑1 (MQ=255) tttGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGtt < 5:211582/132‑1 (MQ=255) tttGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGtt > 6:211582/1‑132 (MQ=255) tggtggtggGGTCAGCATTGGAGGGCTTCATTTTTTCTT‑GCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTc < 7:146938/148‑1 (MQ=255) gtggtggCGTCATCATAGCATGTGTTCATTTTATGTA‑GCTGGGTCTTGGGCACATCCTTTTTCAGGCACGTGCTCATGAACGCTTTGCGCTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctg < 7:39497/149‑1 (MQ=255) gtggCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctgct < 1:347386/148‑1 (MQ=255) tggCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCtgctgc > 3:294145/1‑149 (MQ=255) ggCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTgcg > 4:318938/1‑149 (MQ=255) cGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGcgcg < 1:193581/149‑1 (MQ=255) gTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCgg > 5:46625/1‑149 (MQ=255) tCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTTGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGt < 1:329337/149‑1 (MQ=255) ttGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTgg > 2:19581/1‑148 (MQ=255) gTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGa > 1:46034/1‑148 (MQ=255) gTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGa > 4:299641/1‑148 (MQ=255) tCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTTGCGGTGGCGTAGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCt > 1:16901/1‑149 (MQ=255) tCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCt > 5:380089/1‑149 (MQ=255) cttttttCTT‑GCTGGGGGTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTg < 6:196654/148‑1 (MQ=255) aTTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAg > 3:109906/1‑139 (MQ=255) aTTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAg < 4:109906/139‑1 (MQ=255) aTTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTg < 6:380089/149‑1 (MQ=255) ttttttCTT‑GCTGGGTTTGGGGTACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg < 1:130491/149‑1 (MQ=255) ttttttCTT‑GCTGGGTTTGGGGGACATCCTTTTTCCGTCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg < 1:224424/149‑1 (MQ=255) ttttCTT‑TCTGGCTTTGGTGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTggg < 2:70320/148‑1 (MQ=255) tCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCAc < 3:318938/148‑1 (MQ=255) tt‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTg > 6:19516/1‑148 (MQ=255) tt‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTg > 4:370873/1‑148 (MQ=255) t‑GCCGGGCTTGCGGCACATCCTTTATCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaa < 5:337315/149‑1 (MQ=255) gCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGa < 5:270589/147‑1 (MQ=255) cTGGCTTTGGGGCACATCATTTTTAATGCATGTGCTCATGAACGCTTTCCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCTGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaaca < 8:234668/149‑1 (MQ=255) tGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaacaa > 2:92050/1‑149 (MQ=255) tttGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACAcc < 5:19516/149‑1 (MQ=255) acaTCCTTTTTCACGCATGTGCTCAGTATCGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc < 4:291619/149‑1 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 8:313056/1‑149 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGAGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 6:299873/1‑149 (MQ=255) tttttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTaa > 7:241439/1‑149 (MQ=255) tttttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTaa > 2:121332/1‑149 (MQ=255) ttttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAAc > 6:306124/1‑149 (MQ=255) ttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACg < 6:177312/148‑1 (MQ=255) gcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGAttt < 6:46625/149‑1 (MQ=255) agctGCTCTTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgc < 6:383102/146‑1 (MQ=255) ggTTCTCATGTACGCTTTGCGTTCATCGCCCTTGCGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCACCAGCGCCAGTAACGGGATTTgca < 4:294145/149‑1 (MQ=255) ggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgca < 3:370873/149‑1 (MQ=255) gaTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCCCtt > 7:69891/2‑149 (MQ=255) gaTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 5:203955/2‑149 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc < 4:215022/125‑1 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc > 3:215022/1‑125 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACttt < 5:306124/149‑1 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 3:348360/1‑148 (MQ=255) gAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGACCAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCa > 8:81481/1‑149 (MQ=255) tGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCTAAACCTTGGGCTCTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGt < 5:329134/147‑1 (MQ=255) tGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTg < 8:241439/148‑1 (MQ=255) | GGTCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTGGTGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTT‑GCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTG > NC_002947/5518588‑5518883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |