| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,522,792 | T→A | 5.9% | intergenic (+26/+14) | PP_4856 → / ← yhjG | Dps family ferritin/protein YhjG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,522,792 | 0 | T | A | 5.9% | 208.1 / 2.4 | 68 | intergenic (+26/+14) | PP_4856/yhjG | Dps family ferritin/protein YhjG |
| Reads supporting (aligned to +/- strand): ref base T (35/29); new base A (2/2); total (37/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.15e-01 | |||||||||||
CCGCGAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGCCCTGCCACCA > NC_002947/5522646‑5522939 | ccGCGAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCtttt > 4:40584/1‑149 (MQ=255)ccGCGAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCtttt > 1:35687/1‑149 (MQ=255) cgcgAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑g < 6:278674/149‑1 (MQ=255) cgAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCg > 2:293954/1‑149 (MQ=255) cgAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCg < 3:267706/149‑1 (MQ=255) agaTCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGc < 2:373454/149‑1 (MQ=255) gaTCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGcc < 7:229111/149‑1 (MQ=255) tCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGcccc < 1:191320/149‑1 (MQ=255) aTTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCtt < 8:156482/149‑1 (MQ=255) ttCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCAAAA‑GCGGCCCCTTg < 4:165151/149‑1 (MQ=255) cATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTAttt < 2:35687/148‑1 (MQ=255) tCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGCCCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCg > 8:329330/1‑149 (MQ=255) tCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCg > 8:232786/1‑149 (MQ=255) tCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCg > 5:4382/1‑149 (MQ=255) ggggATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGt < 8:201422/148‑1 (MQ=255) aaGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCAc > 8:215699/1‑149 (MQ=255) aCTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCg < 3:293872/149‑1 (MQ=255) cccGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCAACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGgcgc > 7:231209/1‑149 (MQ=255) gAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCa > 8:277420/1‑149 (MQ=255) cATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTTCACGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATctg < 1:293954/149‑1 (MQ=255) tCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATctgctg < 7:277420/149‑1 (MQ=255) ccTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATctgctg > 2:122470/1‑148 (MQ=255) cgcAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTc > 6:370272/1‑117 (MQ=255) cgcAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTc < 5:370272/117‑1 (MQ=255) gcAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCATGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCaacaac < 7:215699/149‑1 (MQ=255) gcAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTtg < 3:212313/125‑1 (MQ=255) gcAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTGTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTtg > 4:212313/1‑125 (MQ=255) cAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACg > 2:262644/1‑149 (MQ=255) ggAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGgt > 1:282882/1‑149 (MQ=255) aaGAGGAGCACGCGGACGATATGTCCAACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGgtg < 8:231209/148‑1 (MQ=255) gaggagCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGtgtg > 8:42907/1‑148 (MQ=255) aggagCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCa < 3:40584/149‑1 (MQ=255) ggagCACGCGGACGCTATGTCCGACCTGTGGCAAGGCCGTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCAc < 6:4382/149‑1 (MQ=255) gagCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACt > 3:335272/1‑149 (MQ=255) agCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTg < 7:192379/149‑1 (MQ=255) gCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTgg > 3:324976/1‑149 (MQ=255) aCGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGtt > 4:248115/1‑149 (MQ=255) cgcgGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTc < 2:173616/149‑1 (MQ=255) cgGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCgg < 4:335272/149‑1 (MQ=255) tatGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATcc > 5:233614/1‑149 (MQ=255) gTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCg > 3:192230/1‑149 (MQ=255) tCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCggg > 4:233437/1‑139 (MQ=255) tCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCggg < 3:233437/139‑1 (MQ=255) cTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTgg < 7:329330/149‑1 (MQ=255) aGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATc < 7:63034/149‑1 (MQ=255) gCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAg < 1:262644/149‑1 (MQ=255) tttGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAgcgc > 2:264772/1‑149 (MQ=255) gATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCa < 4:324976/148‑1 (MQ=255) tttCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCGCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCGTGATCTGCTGCAACAACGGTGTGCACTGGTTCGGGGCATCCCCGCTGCTGGGCGCCATCAGCGCCCGCa > 2:211799/1‑149 (MQ=255) tttCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGc > 3:316123/1‑148 (MQ=255) cTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAAc < 6:233614/148‑1 (MQ=255) tGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTGCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAAccc > 2:229315/1‑149 (MQ=255) cacCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGATTTCACCGCCGTCGGCGCCTTGCCTGCCGTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCCTCCCCGCTGCTGGGCGCAATCACCGCCCCCAACCccgc > 5:228137/1‑149 (MQ=255) ccTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCccgccgc > 5:101022/1‑149 (MQ=255) ccTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCccgccgc > 3:289917/1‑149 (MQ=255) cTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCccgccgcc > 1:10291/1‑149 (MQ=255) tCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCccgccgccg > 1:197455/1‑149 (MQ=255) cAAGGGGCCGCAAAA‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGgc < 1:99753/120‑1 (MQ=255) cAAGGGGCCGCAAAA‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGgc > 2:99753/1‑120 (MQ=255) aaGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCggg > 1:134912/1‑148 (MQ=255) aaGGGGCCGCAAAA‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCGTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGc > 5:262803/1‑149 (MQ=255) aGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGcc < 4:192230/149‑1 (MQ=255) ggggCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGcc > 8:161285/1‑148 (MQ=255) ggggCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGcc < 7:161285/148‑1 (MQ=255) gCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGCCCTGc > 7:179979/1‑149 (MQ=255) gCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGCCCTGc > 8:292834/1‑149 (MQ=255) ccGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCAc > 5:143966/1‑86 (MQ=255) ccGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCAc < 6:143966/86‑1 (MQ=255) ccGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGACGCCGGCCCTGcc > 4:301087/1‑149 (MQ=255) cGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGCCCTGcca > 4:79414/1‑149 (MQ=255) tttt‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCAGGGCGCCAACAGCGCCCGCCCCCCCGCCGCCCGGCCTGccaccc > 8:120501/1‑148 (MQ=255) | CCGCGAGATCATTCAATACATCGGGGATAAAGACCCGACTACCCGTCGTATCTTCGAAGACATCCTGGCGCAGGAAGAGGAGCACGCGGACGATATGTCCGACCTGTTGCAAGGCCTTTGATTTCTGACACCCTCAAGGGGCCGCTTTT‑GCGGCCCCTTGCTATTTCCGTGCTTTCACCGCCGTCGGCGCCTTGCCTGCCTTCATCTGCTGCAACAACGGTGTGCACTGGTTCGGGTCATCCCCGCTGCTGGGCGCAATCAGCGCCAGCAACCCCGCCGCCGGCCCTGCCACCA > NC_002947/5522646‑5522939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |